Acinetobacter baumannii BJAB0715: BJAB0715_00792
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Entry
BJAB0715_00792 CDS
T02727
Name
(GenBank) NAD-dependent DNA ligase (contains BRCT domain type II)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abab
Acinetobacter baumannii BJAB0715
Pathway
abab03030
DNA replication
abab03410
Base excision repair
abab03420
Nucleotide excision repair
abab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJAB0715_00792
03410 Base excision repair
BJAB0715_00792
03420 Nucleotide excision repair
BJAB0715_00792
03430 Mismatch repair
BJAB0715_00792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abab03032
]
BJAB0715_00792
03400 DNA repair and recombination proteins [BR:
abab03400
]
BJAB0715_00792
Enzymes [BR:
abab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BJAB0715_00792
DNA replication proteins [BR:
abab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BJAB0715_00792
DNA repair and recombination proteins [BR:
abab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BJAB0715_00792
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJAB0715_00792
MMR (mismatch excision repair)
DNA ligase
BJAB0715_00792
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJAB0715_00792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
5_3_exonuc
zf-C2H2_ZFAND2
Motif
Other DBs
NCBI-ProteinID:
AGQ05438
LinkDB
All DBs
Position
873908..875944
Genome browser
AA seq
678 aa
AA seq
DB search
MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSP
TTKVGGQALSKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGL
AISLWYENGVLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMP
KSGFEKLNADQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLT
TMHDSLQWLTELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQ
QQLGFLSREPRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVT
LHNIGEIHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVM
PEGEALARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHL
HEHRETLLGIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTL
EALKAANVEALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLN
GESWVLTGTLEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPV
MNETDFLSLMAGYGQTLS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacttccgtgatcgaacagatgcgtcagcttattcaactgattgcaaagcat
aaccatgcctactatgtcatggatcagccgacaatctcggacagtgaatatgatcattta
tttcatcagttaaaagctttagaagaacaatatccggaatttgtacaagccgactcacca
acaacgaaagtaggtggtcaagcgctttcaaaatttgagagtgtgacacatgtggtgcca
atgctttcacttggtaatgtatttaaccaagaagacttatttgcatttgcacgccgtgta
gaagagcgacttccgaaccagaaagtacaatatgaagttgagttaaaactcgatggcctt
gcgatttcactatggtatgaaaatggtgtactcgttcgcggcgtaacccgtggggatggc
gaaacgggtgaagacattactcaaaatgttaaaaccattcgtaacttacctaaagttctg
cattcagaaaaatatgaaatacctcgtctacttgaagtacgtggtgaagtattgatgcca
aagtctggttttgaaaaactcaatgctgaccaagaagcaaagggagaaaaaaccttcgct
aaccctcgaaatgcagccgctggaagtttaagacaacttgatccaaatattgctgctgct
cgacctttggcattttatgcgtatgggattgcacagtgtgaaccaaatcatggcctaaca
accatgcatgatagcttgcaatggttaacggaacttgggttccaaattgctgagcgtcag
tacttgtgtaattcaattcaagaagtacagcagcgctatgagcaaattcagcaagaacgt
ccaaacttgcaagttgaaattgatggcatggtggtgaaggttgatgacctaaaacaacaa
cagcagcttggtttcttaagtcgtgaaccacgctgggcaactgcttataaattcccggca
caagctgcattaactacagttgagcagattgactggcaagtagggcgtacagggactttg
acaccagtagcacgcttaaaccctgtttttgtaggtggtgtaactgtttctaatgtaacg
ttgcataatattggggaaattcatcgtctggatgtacgcattggcgatacggtaagtgta
tatcgtacgggtgacgtgatccctaaagtagaaaaagtttggccggagttccgtcctgct
gaagcagaagttgttcatttaccagagtcctgcccagtatgtgcttcgcctgtagtgatg
cctgaaggtgaggctcttgcacgttgttcaggcggtttatattgtgctgcacagcgtatt
gaagccattcgtcactttgtatcgcgtaaagcgatggatatcgagggtttgggagatcgt
tgggtagaatctttattacgtctcgatttacttaaagatgttgctgatatttaccatttg
catgagcacagagaaactctgttgggcatcgaaaaaatgggagaaaagtcagtacagaac
ttaatagatgcgattgaagcaagtaagaaaacaactctagcacgttttatttatgcatta
ggtattcgtggagtaggtgaaacaacggctagaatgttagcaaatacatttcagacactt
gaggctcttaaagctgcgaatgtagaagctttaaagaaaactccagatgtaggggatatt
acagcagagtggattgctgactttttcttggcaccgcataacattgaagtgctcgatcgt
ttaattgccgcaggaattcattgggatgcgccaacagcaccaacgcgacaacctttaaat
ggtgaaagctgggtacttacaggtacattagagcaaatgacccgtgatcaggccactcaa
atgctacaagcattaggtgcacgagtaagtgggagtgtttctagcaaaacgaaatgtgta
gttgctggtgagaaggcgggttcaaaattagaaaaagctgcaaagttaggtattcctgtc
atgaatgaaacagatttcttatcactcatggcaggctatgggcaaactttgagctaa
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