Acinetobacter baumannii LAC-4: ABLAC_30500
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Entry
ABLAC_30500 CDS
T03519
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abal
Acinetobacter baumannii LAC-4
Pathway
abal03030
DNA replication
abal03410
Base excision repair
abal03420
Nucleotide excision repair
abal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABLAC_30500
03410 Base excision repair
ABLAC_30500
03420 Nucleotide excision repair
ABLAC_30500
03430 Mismatch repair
ABLAC_30500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abal03032
]
ABLAC_30500
03400 DNA repair and recombination proteins [BR:
abal03400
]
ABLAC_30500
Enzymes [BR:
abal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABLAC_30500
DNA replication proteins [BR:
abal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABLAC_30500
DNA repair and recombination proteins [BR:
abal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABLAC_30500
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABLAC_30500
MMR (mismatch excision repair)
DNA ligase
ABLAC_30500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABLAC_30500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AIY38405
LinkDB
All DBs
Position
complement(3163983..3166019)
Genome browser
AA seq
678 aa
AA seq
DB search
MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPEFVQADSP
TTKVGGQALSKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGL
AISLWYENGVLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMP
KSGFEKLNADQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLT
TMHDSLQWLTELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQ
QQLGFLSREPRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVT
LHNIGEIHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVM
PEGEALARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHL
HEHRETLLGIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTL
EALKAANVEALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLN
GESWVLTGTLEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPV
MNETDFLSLMAGYGQTLS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacttccgtgatcgaacagatgcgtcagcttattcaactgattgcaaagcat
aaccatgcctactatgtcatggatcagccgacaatctcggacagtgaatatgatcattta
tttcatcagttaaaagctttagaagaacaatatccggaatttgtacaagccgactcacca
acaacgaaagtaggtggtcaagcgctttcaaaatttgagagtgtgacacatgtggtgcca
atgctttcacttggtaatgtatttaaccaagaagacttatttgcatttgcacgccgtgta
gaagagcgacttccgaaccagaaagtacaatatgaagttgagttaaaactcgatggcctt
gcgatttcactatggtatgaaaatggtgtactcgttcgcggcgtaacccgtggggatggc
gaaacgggtgaagacattactcaaaatgttaaaaccattcgtaacttacctaaagttctg
cattcagaaaaatatgaaatacctcgtctacttgaagtacgtggtgaagtattgatgcca
aagtctggttttgaaaaactcaatgctgaccaagaagcaaagggagaaaaaaccttcgct
aaccctcgaaatgcagccgctggaagtttaagacaacttgatccaaatattgctgctgct
cgacctttggcattttatgcgtatgggattgcacagtgtgaaccaaatcatggcctaaca
accatgcatgatagcttgcaatggttaacggaacttgggttccaaattgctgagcgtcag
tacttgtgtaattcaattcaagaagtacagcagcgctatgagcaaattcagcaagaacgt
ccaaacttgcaagttgaaattgatggcatggtggtgaaggttgatgacctaaaacaacaa
cagcagcttggtttcttaagtcgtgaaccacgctgggcaactgcttataaattcccggca
caagctgcattaactacagttgagcagattgactggcaagtagggcgtacagggactttg
acaccagtagcacgcttaaaccctgtttttgtaggtggtgtaactgtttctaatgtaacg
ttgcataatattggggaaattcatcgtctggatgtacgcattggcgatacggtaagtgta
tatcgtacgggtgacgtgatccctaaagtagaaaaagtttggccggagttccgtcctgct
gaagcagaagttgttcatttaccagagtcctgcccagtatgtgcttcgcctgtagtgatg
cctgaaggtgaggctcttgcacgttgttcaggcggtttatattgtgctgcacagcgtatt
gaagccattcgtcactttgtatcgcgtaaagcgatggatatcgagggtttgggagatcgt
tgggtagaatctttattacgtctcgatttacttaaagatgttgctgatatttaccatttg
catgagcacagagaaactctgttgggcatcgaaaaaatgggagaaaagtcagtacagaac
ttaatagatgcgattgaagcaagtaagaaaacaactctagcacgttttatttatgcatta
ggtattcgtggagtaggtgaaacaacggctagaatgttagcaaatacatttcagacactt
gaggctcttaaagctgcgaatgtagaagctttaaagaaaactccagatgtaggggatatt
acagcagagtggattgctgactttttcttggcaccgcataacattgaagtgctcgatcgt
ttaattgccgcaggaattcattgggatgcgccaacagcaccaacgcgacaacctttaaat
ggtgaaagctgggtacttacaggtacattagagcaaatgacccgtgatcaggccactcaa
atgctacaagcattaggtgcacgagtaagtgggagtgtttctagcaaaacgaaatgtgta
gttgctggtgagaaggcgggttcaaaattagaaaaagctgcaaagttaggtattcctgtc
atgaatgaaacagatttcttatcactcatggcaggctatgggcaaactttgagctaa
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