Candidatus Nanopelagicus limnes: B1s21122_02060 Help Entry B1s21122_02060    CDS       T05073                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism abam  Candidatus Nanopelagicus limnes Pathway abam03030   DNA replication abam03410   Base excision repair abam03420   Nucleotide excision repair abam03430   Mismatch repair Brite KEGG Orthology (KO) [BR:abam00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B1s21122_02060    03410 Base excision repair     B1s21122_02060    03420 Nucleotide excision repair     B1s21122_02060    03430 Mismatch repair     B1s21122_02060  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:abam03032]     B1s21122_02060    03400 DNA repair and recombination proteins [BR:abam03400]     B1s21122_02060 Enzymes [BR:abam01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B1s21122_02060 DNA replication proteins [BR:abam03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B1s21122_02060 DNA repair and recombination proteins [BR:abam03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B1s21122_02060    NER (nucleotide excision repair)     GGR (global genome repair) factors      B1s21122_02060    MMR (mismatch excision repair)     DNA ligase      B1s21122_02060   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B1s21122_02060 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT HHH Motif Other DBs NCBI-ProteinID:  ASY09137 UniProt:  A0A249JX83 LinkDB All DBs Position complement(878483..880519) Genome browser AA seq 678 aa AA seqDB search MSAEIRHKIQELCEEISDHQFKYYVLDAPTITDAAFDKLWNELVTLEKKYPQYKLESSPT LQVGGGFSTSFAQFDHIEKMMSLDNVFDDKELETWFDRIDKAGVKNGWLCEVKVDGLAIN LLYEDGRLTRALTRGNGTTGEDVTLNIKTIKSVPTELSGKNLPTTLEVRGEVFFPLQSFD ELNDSLEEAGKPRFANPRNAAAGSLRQKDPKITASRPLDVVVHGIGAATGISFEKQSNAY ELLKGWGLPTSKRYKVVSTRKEVLDFIKVYEKDRHNVEHEIDGVVIKVNEISVQNTLGFT SRAPKWAIAYKYPPEEVVTKLLDIKVSVGRTGRVTPFAFMEPVKVAGSTVTNATLHNAQE IVRKGILIGDTVLIRKAGDVIPEVLAPVLEKRNGSEKAFVMPSKCPDCGSKLRAMSEGDV DIRCPNSQSCPAQVVERLFYIGSRSALDIDVLGYEAAAALLADKLVVDEGDLFLLTEEKL ASSRFFQKIVKKELTAGKNVKKLLDGLQEAKSKPLWRVLVALSIRHVGPTSAKALTDKFG SIEKIRSASIEELSNTEGVGEIIAESIKEWFGEDWHKQIIMKWERAGVALVDAPREKLKQ TLAGLTIVATGSFKDFTRDEAIEAIVARGGKAASSVSSKTDYVVAGDSAGSKLDKAQELG ITILDEAGFKLLLEKGIN NT seq 2037 nt NT seq  +upstreamnt  +downstreamnt atgagcgcagaaattagacataaaatccaggagctttgcgaagaaatatcagatcatcaa tttaagtactatgttttagatgcaccaacaattaccgatgctgcctttgataagttatgg aatgagttagtaacacttgaaaagaagtatcctcaatacaaattagaaagctcacctact ttgcaggttggcgggggcttttcaacctcctttgcccagtttgatcacatcgagaagatg atgagcctagataacgtctttgatgataaagaacttgaaacttggtttgatcgaattgat aaagctggagttaaaaatggctggttatgtgaggtcaaagttgatggcctagcaattaat ttactttatgaagatggcaggctcactagggctcttacccgtggcaatggaacaacaggt gaagatgtaactttaaacattaagacgattaaatctgtaccaactgaattatctggaaaa aacttaccaacgacacttgaagttcgcggtgaggtatttttcccattgcaatcatttgat gagttaaatgattctttggaagaagcaggcaaaccaagatttgctaatccaagaaatgca gcagctggatcccttcgccagaaagatccaaagatcacagcatcacgcccccttgatgtt gtagtccatggcattggcgctgccactggtatttcattcgaaaaacaatcaaatgcttat gagctacttaaaggttggggtttgccaactagtaagcgatataaagtggtttcaactcgc aaagaggttttagatttcataaaagtgtatgaaaaagatcgtcacaatgttgagcatgag atagatggtgttgtaattaaagtaaatgagatctcagttcaaaacactcttggctttacc tcacgggcgccaaaatgggcgattgcctataagtatccgccggaggaggttgttacaaag ttattagatataaaggtcagtgttggtagaactggtcgagtaactccttttgcttttatg gagccagtaaaagtagctgggtcaaccgtaaccaatgcaacactgcacaacgcgcaagag attgttagaaaaggaattttgattggcgatacggtcttaatccgtaaagcaggagatgta atcccagaagttttagcgccagttcttgaaaaaagaaatggaagtgaaaaggcatttgta atgccaagtaaatgcccagattgtggcagcaaacttcgcgctatgagtgaaggtgatgtt gatattcgttgcccgaactcacaatcatgcccagcccaagttgtggaaaggcttttctat attggctctcgctcggctctagatattgatgtattaggttatgaagcagcagcagcatta ctggcagataagttagtggtagatgagggagaccttttcctactcactgaagaaaaactt gctagttctaggttttttcaaaagatcgtaaagaaagagttgactgcaggtaagaatgta aaaaaacttttagatggacttcaggaagcgaaaagcaagccactttggagagttttagtt gctctatcaattaggcatgtcggaccaactagtgcgaaagcgcttacagataagtttggt tcgattgaaaaaattagatctgcaagtattgaagaattatcaaacactgaaggcgtgggc gaaataattgcggaatcaataaaagaatggtttggcgaggattggcataaacaaattatt atgaaatgggagagggcaggcgtagccctagttgatgctcctagagaaaaactcaaacaa actctggcgggtcttacaatcgttgcaactggttcatttaaagatttcactagagatgaa gcgattgaggccattgtggcaaggggcggaaaagcagcatcgtcggtatctagtaaaact gattacgttgtggcaggggattcggctggttctaagttagataaagcacaagaactagga attactatccttgatgaggccggatttaaattattactggagaaggggataaactaa

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