Candidatus Nanopelagicus limnae: B1s21122_03770
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Entry
B1s21122_03770 CDS
T05073
Name
(GenBank) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
B1s21122_03770
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
abam01007
]
B1s21122_03770
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abam03016
]
B1s21122_03770
Enzymes [BR:
abam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
B1s21122_03770
Amino acid related enzymes [BR:
abam01007
]
Aminoacyl-tRNA synthetase
Class I (U)
B1s21122_03770
Transfer RNA biogenesis [BR:
abam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
B1s21122_03770
Prokaryotic type
Other AARSs
B1s21122_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
GP52
Motif
Other DBs
NCBI-ProteinID:
ASY09454
UniProt:
A0A249JY54
LinkDB
All DBs
Position
complement(526970..530110)
Genome browser
AA seq
1046 aa
AA seq
DB search
MNKKRKINSLPAQIDLPAMEMGILDFWTQNQVFEKSVENRNGAARWSFYEGPPTANGKPG
THHIEARVFKDLFPRFQTMKGKQVIRKAGWDCHGLPVEIAVEKELGFTGKADIEKFGVAA
FNEKCKESVQRHVDEFTDMTKRMGFWVDFDEAYWTMSPEYIESVWWSLQQIWNKGLLVQD
HRVAPYCPRCGTGLSDHELAQGYETIKDPSVFVRFPVTSGKLAELKASLLVWTTTPWTLV
SNTAVAVNPKVEYQVVEITVDEKTERLVVAADLASVLGEDRKVIATFIGKDLEHTKYSRP
FDFVEINDSHFVVLADYVTVEDGTGLVHQSPAFGADDLEVCRKYNLPVVNPVNPDGHFQK
EVPLIGGVFFKDADKALIKDLKSRGLMFKSLQFEHSYPHCWRCHTALMYYAQPSWYVKTT
AIKEDLLRENSKTNWHPETIKTGRFGDWLNNNIDWAVSRNRYWGTPLPIWRCENKHEICV
GSLAELGKLAGQELSKLDPHRPFVDDIKFKCDKCSETMQRIPEVIDCWYDSGAMPFAQWG
YPRQSGSVEKFNATYPADFICEAIDQTRGWFYTLMTIGTLVFDKSSYKTVLCLGHILDKD
GRKMSKHLGNVLEPMPLMNQHGADAVRWYMLAAGSPWSARRVGHDAISDVVRKTLLTYWN
TISFFTLYANAADFEVSKVSADLTLMDKWILSELNKLIVGVDKALENFDSQEAGQLLAAF
IDDLSNWYVRRSRRRFWDGDEVALNTLYFCLKNLTLLLAPMVPFIAEHVWQSLIKVAEAD
QVESVHLADFPEANKKMIDENLSTSVALSRRLVELGRSARAESGVKIRQPLSRALVSAPG
WAKISEEIKTHIAEELNILKLDGIHVAEADLVDVSVKANFRTLGTKFGADVQIIAKAITS
ANHTEMVKHLRENKSFKLSVDLTNGSKSAEIDIDDLVVTETPRTGWSVASHAGESLALDL
ALTPELIQSGLVREVIRAIQEERKKIGLDVSDRISVNWNAPDQVASAITSAVAEISAEVL
ATNLVQDKGQSSDGNELGLWLNLVKN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaagcgcaagattaatagcttacctgcgcaaattgatctgcctgcaatggaa
atgggaattctagatttttggactcaaaatcaggtttttgaaaaatcagttgaaaataga
aatggtgcagctcggtggagtttttatgaaggcccaccaactgcaaatggtaagccgggt
acacaccatattgaggcgcgagtatttaaggatttgtttccccgttttcaaacaatgaaa
ggcaagcaagtaattcgcaaagctggttgggattgccatggtttgccagttgagattgct
gttgaaaaagagttgggcttcacaggtaaagcagatattgaaaaattcggcgtggcagcc
tttaatgaaaaatgcaaagagtcagtgcagcgacatgttgatgagtttacggacatgaca
aaacgaatgggcttttgggttgatttcgatgaagcgtattggactatgtcgccagaatat
atcgagagtgtttggtggtcgcttcaacaaatttggaacaaagggttattggttcaagat
catcgggttgcgccgtactgcccaagatgtggaactggattatcagatcatgaattagcc
caaggatatgaaactattaaagacccatcagtttttgttcgctttccagtaacttcggga
aaattagccgaactgaaagcaagcctgttggtttggactacaacaccttggacattggta
tcaaatacagcagtagctgttaacccaaaggttgagtaccaagtagttgaaattactgtt
gatgaaaagaccgaacggttagttgtggcggcagatttggcctccgtgttaggtgaagat
agaaaagtaattgccaccttcattggtaaggatcttgaacatacgaaatactcccggccc
tttgattttgtcgaaatcaatgactctcattttgtggttctagccgattacgtgacagtt
gaagatggcaccggtttagttcaccaatctccagcttttggagcagatgacctagaagtt
tgtcgcaaatacaacctgccggttgtaaatccagttaacccggatggccattttcaaaaa
gaggtgccattaattggcggtgtatttttcaaagatgctgataaagctctgattaaggat
ttgaaatctcgtggcttaatgtttaaaagtttacagtttgagcactcctaccctcattgc
tggagatgtcacacagctttgatgtattacgcacaaccttcttggtatgtaaaaaccact
gcaattaaagaagatcttctacgagagaactcaaaaactaattggcatccagaaacgatt
aaaactggcagatttggcgattggttgaataacaatattgattgggcggtatcgcgtaat
cgttactggggcacacctttaccaatttggagatgtgaaaataagcatgaaatctgtgta
ggttcccttgccgagcttggaaaattagcaggtcaagagttaagcaaattagatccgcat
cgtccctttgtagatgacattaaattcaagtgtgataaatgttctgaaaccatgcaaaga
attcccgaggtaattgattgctggtatgactcaggtgcaatgccatttgcccaatggggt
tacccacgccaatctggatcggttgagaagttcaacgccacctaccctgcggattttatt
tgcgaagccattgatcaaactagaggttggttctacacattaatgacaattggcacttta
gtttttgataaatcttcatataaaactgttctttgtttaggacatatcttggataaagat
ggtcgaaagatgagtaagcaccttggaaatgtgcttgaacctatgccattaatgaatcag
catggcgctgatgctgtgcgctggtacatgctggctgctggatcaccttggagtgctcgt
cgggtaggacatgatgcaatctctgatgtagttcgtaaaactctgcttacctactggaac
acaatctccttcttcactctctatgccaatgctgcagattttgaagtttcaaaagtttca
gctgatttaactttgatggataagtggatcctctccgaactaaacaaattaattgttggc
gtagataaagcacttgaaaattttgattcacaagaggctggtcaacttctggcagccttt
atcgatgatctttccaactggtatgtgcgcagatcacgccgccgcttttgggatggcgat
gaagttgccctaaacactctttatttttgcttaaagaatctgactctcctgctggctcca
atggtgccatttattgccgaacatgtttggcaatctttgattaaagttgctgaagctgac
caggttgaatctgtgcatttggctgattttccagaagctaataaaaagatgatcgatgag
aatctttcaacctctgttgcgctatcaaggcgcttagttgagttgggaagatctgccaga
gcagaatctggggtaaagattcgtcaaccactttccagagcacttgtttcagctcctggt
tgggcaaagatttctgaggaaattaagactcatatcgccgaagaattaaatatcctcaaa
ttagatggcattcatgtcgccgaagcagatttagtagatgtatcagtcaaggctaacttt
agaactcttggcacgaaatttggtgctgatgttcaaataatagctaaggcaatcacctca
gctaatcacacagaaatggttaaacacctgcgcgagaataaatcctttaaattatcggtg
gacctaacaaatggttcaaagtctgctgagattgatattgatgatttggttgtaactgaa
acacctcgaactggttggtcggttgcatctcatgccggtgaaagcttggctttagatttg
gcattaacccctgagctaattcaatcaggactagtgcgtgaggtaattagagcaatccaa
gaggagcgcaaaaagattggcttagatgtaagtgatcgaattagtgttaattggaacgct
cctgaccaggttgcatccgcaatcacctcagctgttgctgaaattagcgcagaggttttg
gctaccaatttggtgcaagataaaggtcaaagcagtgatggcaacgagcttggactttgg
ttaaatctagtaaagaactaa
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