Candidatus Nanopelagicus limnae: B1s21122_05265
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Entry
B1s21122_05265 CDS
T05073
Symbol
kgd
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam00020
Citrate cycle (TCA cycle)
abam00630
Glyoxylate and dicarboxylate metabolism
abam00785
Lipoic acid metabolism
abam01100
Metabolic pathways
abam01110
Biosynthesis of secondary metabolites
abam01120
Microbial metabolism in diverse environments
abam01200
Carbon metabolism
abam01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B1s21122_05265 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
B1s21122_05265 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
B1s21122_05265 (kgd)
Enzymes [BR:
abam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
B1s21122_05265 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
B1s21122_05265 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
B1s21122_05265 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
B1s21122_05265 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ASY09729
UniProt:
A0A249JYY8
LinkDB
All DBs
Position
complement(230039..233794)
Genome browser
AA seq
1251 aa
AA seq
DB search
MSEVGANTPANHFGGSFGPNEWLVQEMYERYQSDPSSVDKAWWDFFADFKGNSSLNGAVI
SSTPATKPGTPPIPKSQLAKPAPAAAVVTPPVVVAPVVVEKVEPAVVASTTFKPADPIVK
PIPTLVTPGASSVEPLRGVAARVVQSMEGSLTVPTATSVRAVAAKLMIDNRTVINNHLKR
GRGGKVSFTHLIGYAMIKAIRAMPEMNAFFTELEGKPAIGHPEHINLGIAIDLAKPDGSR
QLLVPSIKGCEDLDFAQFWSAYEETVRKARGGSLTVEDFAGTTISLTNPGTIGTVHSVPR
LVQGQGTILGVGALDYPAEFHGANEQTLADLGISKVVTLTSTYDHRIIQGAQSGDFLRRI
NQILLGEENFYDEIFEALRIPYVPIRWVVDMQDAKADEASKTAKVQKLIDAYRTTGHLMA
DVEPLAYVQRSHPDLDVVTHGLSLWDLDREFATDGFGGKPTMKLRRILGILRDSYCRTIG
VEYMYIANPLERKWIQERIEVGAPRTAREEQLRILRKLNSAEAFESFLQTKYVGQKRFSL
EGGESVIPLLDAMISSAAESKLDEVCIGMPHRGRLNVLANIAGKSYGQIFQEFEGNYHEN
EVHGSGDVKYHLGTKGVFTAESGATTKIYLAANPSHLEAVNPVLEGIVRAKQDKLRAAAG
DFSVDEQTSYPVLPILLHGDAAFAGQGVVSETLSLSLLKGYRTGGTIHIVVNNQVGFTTS
PHAARSSTYSTDIAKMIQAPVFHVNGDDPEACVRVARLAFEYRQEFNKDVVIDLICYRRR
GHNEGDEPSFTQPLMYKLVDAKRSTRKLYTEALIGRGDITVEEAEEVLRDYQQQLEGVFS
SVHNTEPASDPNWKAPVVPAPEAVKTAVSEADLKKIAATQGDFPKDFTVHPKLLPQLLKR
TEMLADGTVDWAAGEMFAFGSLLLEGHPIRMSGQDVRRGTFSNRHAVVVDKETGADLFPL
RSLVKDPNQFHIYDSFLSEYAVMGFEYGYSVERDNALVIWEAQFGDFANGAQTIVDEFIS
SALQKWGERTSVVLLLPHGYEGQGPDHSSGRIERFLTLCAEQNMTVAQPSTPASYFHLLR
WHMKNPARRPLIVFEPKSMLRLKAAASELTDFTTGTFKPLIADPKVQNATRLIFTSGKVY
YDLIAEREKLNEFSTAIVRIEQLYPLPVDEMIAQVKLHPNATLLWVQDEPANQGPWPFVA
LAVAEAFVAHDELAGRSLRRVSRRATASPATGNHHLHEEEEKALMTEAFTR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaagtaggagctaatacgcccgctaatcactttggtggctcttttggacctaat
gagtggttagtgcaagaaatgtatgaacgctaccaaagtgatccatcttcagttgataaa
gcctggtgggatttctttgcagatttcaaaggtaattcatcattaaatggcgcagtaatt
tcatctacgccagcaactaaacctggcacacctcctattccaaaatcacaattagctaaa
ccagcaccagctgcagcagttgttacaccgccagttgtagttgccccagttgttgttgaa
aaagttgagccagctgtagttgcaagtacaacatttaagccagccgatccaattgttaaa
ccaattccaaccttggttacaccaggagcatcctctgttgagccactacgcggtgtggca
gccagagttgtgcaatcgatggaaggctcattaacagttccaacggcaactagtgttcgc
gcagttgcggcaaaacttatgattgataatcgcactgtaattaataatcatttaaagcga
ggccgtggcggcaaagtttcatttacccacctaattggttatgccatgatcaaggcaatc
cgagcaatgcctgagatgaatgcattttttacagagttagagggcaaaccagcaattgga
caccctgaacatattaatttaggtattgcaattgatttagccaagccggatggatctcgc
caattacttgtaccatcaataaaaggctgtgaagatttagattttgcgcaattctggtct
gcctatgaagaaactgttagaaaagcacgtggtggctccttaacagttgaggattttgcc
ggcacaacaatttcactaactaatccaggaacaattggcacagttcattctgtgccgcgc
ttagtgcaaggacaaggcacaattcttggagttggtgcgctggattacccggcagagttt
catggcgcaaatgaacaaactttggcagatctaggaatcagcaaagttgttacattaact
agtacatacgatcatcgaattattcaaggtgcacaatctggcgactttttacgtcgaatt
aatcagatattacttggtgaagaaaacttctatgatgaaatttttgaagcactgcgaatt
ccttatgtaccaattcgctgggttgttgatatgcaagatgcaaaggctgatgaggcaagc
aaaaccgctaaagttcaaaaattaatcgatgcatatcgaacaactggtcatttaatggca
gatgttgagccattagcttacgttcaaagatcacacccagatttagatgtagtaactcac
ggtctctcgctctgggatcttgatcgcgagtttgcaactgatggttttggtggcaagcca
acaatgaagcttcgtagaatcttaggaattcttcgtgattcatactgtcgaaccattggc
gttgaatatatgtatatcgctaatccattagagcgaaagtggattcaagagcggattgaa
gttggcgcccctagaactgcccgcgaggaacaacttcgaattttaagaaagttaaattca
gcagaggcttttgaatcatttttacaaactaaatatgttggccaaaagcgattctcacta
gaaggtggtgaatcagtaatcccacttctagatgcaatgatttcatctgcggctgagagt
aaattagatgaggtctgcattggtatgccccaccgtggtcgtttaaatgttttagcaaat
attgcaggtaaatcttatggccagatatttcaagagtttgaaggcaattatcatgaaaat
gaagtgcatggttcaggtgatgttaagtaccaccttggaactaaaggagtattcactgca
gaaagtggagctacaaccaagatttacttagctgctaatccatctcaccttgaagcggta
aatccagtgctagaaggaattgttcgagcaaagcaagataaattaagagcagctgctggt
gatttttcagttgatgaacaaacttcttacccagttctaccaatacttttacatggtgat
gctgcatttgcaggtcaaggcgtggtctctgaaaccctctcactttcactattaaagggt
tatcgcacaggtggcaccattcatatcgtggttaataatcaggttggatttacaacctca
ccacatgctgcaagatcatcaacttattcaactgatatcgccaagatgattcaggctccg
gtctttcatgttaatggtgatgatcctgaagcatgtgttcgagttgcaaggttggctttt
gaatatcgccaagagtttaataaagatgttgtcattgatctgatctgctaccgcagacgt
ggtcacaatgaaggtgatgagccaagctttactcaaccattgatgtataaattagtggat
gccaagcgatccaccagaaagctttacaccgaagcgttaattggccgcggtgacataact
gttgaagaggctgaagaggtgttgcgtgattaccagcaacaactagagggtgtatttagt
tcagttcacaatactgagccagcaagtgatccaaattggaaagctccagttgtgccagca
ccagaggcagtgaaaactgccgtgagtgaagctgatttaaagaagattgccgctactcaa
ggtgattttccaaaagatttcacagtacatccaaaattactgcctcaactattaaagcgc
actgaaatgcttgccgatggcacagttgattgggcagcaggtgaaatgtttgcattcggt
tcattacttcttgaaggtcatccaatcagaatgagtggtcaagatgttagacgtggaaca
tttagtaatcgccacgcagtagtagttgataaggaaactggcgcagatcttttcccactt
aggtcattggttaaagatccaaatcaattccatatctatgactccttcctatctgagtat
gcagtgatgggatttgagtatggctactccgttgagcgcgataacgccttagttatttgg
gaagcgcaatttggagatttcgcaaatggtgctcaaactattgttgatgaatttatctcg
tccgctcttcaaaaatggggtgagcgaacctctgtggtgctcttgttgccacatggctat
gaaggtcaaggacctgatcactcatctggtcgaattgaaagatttttaaccttatgtgct
gaacaaaacatgacagtagctcagccatcaactcctgcttcatattttcatctacttaga
tggcatatgaaaaatccagcacgaaggccgctaattgtttttgaaccaaaatcaatgctg
cgcttaaaagctgctgcaagtgaattaactgattttacaactggcacatttaaaccgtta
attgcagatccaaaagtacaaaatgcaactcgtttaattttcacatctggaaaggtttac
tacgatctaattgccgagcgggaaaaattaaatgagttctcaactgcaattgtcagaatt
gaacagttatatccactgccagttgatgaaatgattgcccaagtaaaactacatccaaat
gcaactttgctatgggtacaagatgaaccggccaaccaaggtccttggccattcgttgcc
ctagctgtggctgaagcttttgttgctcatgatgagttagccggccgaagtttgcgaaga
gtttctagaagagcaactgcaagccctgctactggaaaccatcacctgcatgaagaggaa
gagaaggctttaatgactgaagcctttacgcgttaa
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