Candidatus Nanopelagicus limnae: B1s21122_05985
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Entry
B1s21122_05985 CDS
T05073
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
abam
Candidatus Nanopelagicus limnae
Pathway
abam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1s21122_05985 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abam03400
]
B1s21122_05985 (nth)
Enzymes [BR:
abam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B1s21122_05985 (nth)
DNA repair and recombination proteins [BR:
abam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1s21122_05985 (nth)
Prokaryotic type
B1s21122_05985 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ASY09855
UniProt:
A0A249JZA9
LinkDB
All DBs
Position
84308..85009
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AA seq
233 aa
AA seq
DB search
MRESLAQKKVRARAIYRILCKSYPNVRCELSYKTPFQLLVATVLSAQCTDKRVNQTTPAL
FKKYPNPIKMAQADINDIQRLVKSTGFYRAKAKNIKSLSSKIVTDFDSKVPNKLESLITF
PGVGRKTANVVLGHAFGIPGLTVDTHFGRLSRRFKWSKSMDPVKVEFEVADLITRKEWTN
LSQRLIWHGRRVCHSRKPACGACPIAKHCPSFGIGEMDPIKAKRMVKVEADFK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagagtttggctcaaaagaaagttcgagcaagggctatctatcggattctatgt
aaaagctatccaaatgttaggtgtgaattaagttataaaactccctttcaattactagtt
gcaactgttctatcggcgcaatgcaccgataagcgagtgaatcaaacaacacctgcctta
tttaagaaatatccaaatccaataaaaatggcccaagctgatattaatgatattcaaaga
ttggttaaatcaactgggttttatcgggcgaaggctaagaatataaaatcacttagtagc
aagatagttacagattttgatagcaaggtgccaaacaaattagaaagtttgatcactttt
ccaggtgttggcaggaagacagcaaatgtagttttaggtcatgcatttggtattccaggc
ttaaccgttgacactcactttggcagattaagtagaagatttaagtggagtaaatctatg
gacccggtaaaggttgagtttgaagttgctgatttaatcacaagaaaagagtggactaat
ttgtcgcagcgcttaatctggcatggcagaagagtgtgtcactccagaaagccagcgtgt
ggtgcatgcccaattgctaagcactgtccatcctttggaataggtgagatggatccaatt
aaggcaaagcgaatggtgaaagttgaggcagattttaaatga
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