Anaerolineaceae bacterium oral taxon 439: BEQ56_07140
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Entry
BEQ56_07140 CDS
T04463
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abao
Anaerolineaceae bacterium oral taxon 439
Pathway
abao03030
DNA replication
abao03410
Base excision repair
abao03420
Nucleotide excision repair
abao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEQ56_07140
03410 Base excision repair
BEQ56_07140
03420 Nucleotide excision repair
BEQ56_07140
03430 Mismatch repair
BEQ56_07140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abao03032
]
BEQ56_07140
03400 DNA repair and recombination proteins [BR:
abao03400
]
BEQ56_07140
Enzymes [BR:
abao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BEQ56_07140
DNA replication proteins [BR:
abao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BEQ56_07140
DNA repair and recombination proteins [BR:
abao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BEQ56_07140
NER (nucleotide excision repair)
GGR (global genome repair) factors
BEQ56_07140
MMR (mismatch excision repair)
DNA ligase
BEQ56_07140
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BEQ56_07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
5_3_exonuc
HHH_8
EHD_N
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AOH43267
UniProt:
A0A1B3WQP3
LinkDB
All DBs
Position
complement(1584797..1586920)
Genome browser
AA seq
707 aa
AA seq
DB search
MNQPIHYIIPYKKREGEIGMLSILDYIQRIQTLNQHNYRYHVLEQPIITDAEFDRLLNEL
RQIEAAHPDWIRADSPTQRVGAPASGRFPAVAHPKPVLSLANAFSAQDVAAWAERIRKID
PDADSAGYVMEPKIDGLTVVLTYRSGALTGGTTRGDGLVGEDITANIRAIRSVPLRIPLS
NESVPVPETIVVRGEVYIENQDFERLNDEIVRNGEKPYLNPRNTASGSLRQLNPAVTAAR
PLKILIYQVLDDSHDVPIPMQQTERTDYLRKLGFPTFDEARYFPTLDGVLNDIPNWTQIR
ETIRYEIDGIVIKVNDLVTADALGFAGKDPRGAIALKFPAREAMTRLLYISVAVGRTGIL
TPTAMMEPAEIGGATIRQASLHNFDFIRDRDIRIGDQLLIKRAGDVIPYVVASIPERRDG
SQLPYVPPAKCPSCGEPVESFPGEIGLFCINSRCPAQLIRVVEYFASRTAMDIEGLGIRI
VEQICESGMVADYADLYALTRDQLLTLPGFGEKKADNLIAAIEASKSRPLARVINALGIR
NVGEVIAASLANRFGSIAALREAADSELTAIDGVGETLAESIIEWFRSPRNLEIVGKLRQ
AGIDPTVERRDAEGADKNAPENLPLAGQTVVVTGTLKRFTRESIHEQIVRLGGKAGDSVS
RKTSFVIYGEKAGSKLEKARKLGVPVHAEDEFLNTYTQFLESPGEPE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaccgatccattatataataccttataaaaagcgagagggagaaattggaatg
ctctccatactggattatatccaacggattcagacgctgaatcagcataactatcgctac
cacgtacttgaacagccgatcatcaccgacgccgaattcgaccgccttctgaatgaactg
cggcagatcgaagcagcgcatccggactggatccgggccgattcgccgacccagcgcgtc
ggcgcgcccgcctccgggcggttccctgcggtcgcgcatccgaagcccgtcctcagctta
gccaacgccttctcggcgcaggacgtcgccgcctgggccgagcgcatccgaaaaatcgac
ccggacgcggacagcgctggctacgtcatggagcccaaaattgacggactgaccgtcgtt
ctgacatatcggagcggcgccttgacgggcgggacgacgcgcggggacgggcttgtcggc
gaagatatcacggcgaatatccgcgcgatccgctccgttcccctccggatcccgctttcg
aacgaatccgtccccgtccctgaaacgatcgtcgtccgcggcgaagtctacattgaaaat
caggatttcgagcggctgaacgacgaaatcgtccggaacggcgaaaaaccgtacctgaac
ccgcggaataccgcttccggctcgctcaggcagctgaaccccgcggtgaccgccgctcgt
ccgttgaaaatcctgatttaccaggtcctggacgattcgcacgacgttcccatacccatg
cagcaaaccgaacggaccgactacctgcgaaagcttggctttccgacattcgacgaagcc
agatactttccgacgcttgacggcgttctcaacgatattccgaactggacgcagattcgc
gaaacgatccgctacgaaatcgatggcattgtgatcaaggtcaacgacctggtcaccgcg
gacgcgctcggattcgccggaaaagatccgcgcggtgcgatcgcgctgaaattccccgcg
cgcgaagccatgacaagactcctctatatcagcgtcgccgtcgggagaaccgggatcctg
accccaacggccatgatggagcctgcggaaatcggcggtgccacgattcgtcaggcctcg
ctccataacttcgatttcattcgcgaccgcgatattcgaatcggggaccagctcctgatc
aagcgcgccggcgacgtgatcccgtatgtcgtcgcgtcgatccctgaacgccgcgatggg
agccagcttccctacgttccgccggcgaaatgtccttcctgcggcgagccggtcgaaagc
ttccccggcgaaatcggccttttctgtatcaacagccgctgcccggcgcagcttattcgc
gtcgtcgaatacttcgcgtccaggaccgcgatggatatcgaagggctggggatccggatc
gttgaacaaatctgcgaaagcggaatggtcgcggattacgccgacctgtacgccctgacc
cgggaccagctcctgaccctcccgggcttcggagaaaagaaagccgacaacctgatcgcc
gcgatcgaggcctcgaaatcccgtccgctcgcccgcgtgatcaacgcgctcgggatccgt
aacgtcggcgaagtcatcgccgcgtcgttagccaaccgcttcggatcgatcgccgcgctt
cgcgaagcggcggactcggaactcaccgcgatcgacggcgtcggcgaaacgctcgctgaa
tcaattatcgaatggttccgttcccctcgcaacctggaaatcgtcgggaaactccgccag
gccggaatcgatccgaccgtcgaaaggcgcgacgctgaaggcgctgataaaaacgcgccg
gaaaacctgccgctcgccgggcaaaccgtcgtcgtcaccgggacgctcaaacgctttacc
cgcgaatcgatccatgaacagatcgttcgcctgggcgggaaagctggcgactcggtcagc
cggaaaacctcattcgttatttatggcgagaaagccggctcaaaactcgaaaaagcgcga
aaacttggcgtccccgtccacgcggaagacgaatttctgaatacctatacgcagtttctt
gaatcgcccggagaaccggaataa
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