Amycolatopsis bartoniae: AMYBAR_000058
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Entry
AMYBAR_000058 CDS
T10755
Name
(GenBank) CoA ester lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar00630
Glyoxylate and dicarboxylate metabolism
abar00660
C5-Branched dibasic acid metabolism
abar00680
Methane metabolism
abar00720
Other carbon fixation pathways
abar01100
Metabolic pathways
abar01120
Microbial metabolism in diverse environments
abar01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMYBAR_000058
00660 C5-Branched dibasic acid metabolism
AMYBAR_000058
09102 Energy metabolism
00720 Other carbon fixation pathways
AMYBAR_000058
00680 Methane metabolism
AMYBAR_000058
Enzymes [BR:
abar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
AMYBAR_000058
4.1.3.25 (S)-citramalyl-CoA lyase
AMYBAR_000058
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
XMG31236
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All DBs
Position
complement(54929..55999)
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AA seq
356 aa
AA seq
DB search
MRSPKDFFAPLAVGAPDPVREIPALPSRMIHFFDPSNEKMAAKVPDLAKKVDVLLGNLED
AVRADRKEAARQGLVDIAKANDFGSTQLWTRVNSLDSPWVLDDLLTLVTEIGDKLDVIMV
PKVEGAQDIHYVDRLLAQLEARAGLRKPLLVHAILETASGVANVEEIAGASPRMQGISLG
PADLAASRRMKTTRVGGGHPGYLVRTDPVGEDLHEGRTTSQQDLWHYTIARMVDACVLHG
ILPYYGPFGDIRDVVACEDQFRNAFLLGCVGTWSLHPVQIDIAKRVFSPAPEDVAWARRV
IAAMGDGTGAVMIDGKMQDDASFKQCRVVAELADKLAERDPDLRAAYDEATKEALA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgccgaaggacttcttcgcgccgctcgcggtcggggccccggacccggtccgg
gagattcccgcactgccgtcgcggatgatccacttcttcgacccgagcaacgagaagatg
gccgcgaaggtccccgacctcgcgaagaaggtcgacgtcctgctcggcaacctcgaagac
gcggtgcgcgccgaccgcaaggaggccgcgcgccaggggctcgtggacatcgcgaaagcc
aacgacttcggctcgacgcagctgtggacgcgcgtcaacagcctcgactcgccgtgggtg
ctcgacgacctgctcacgctggtcacggagatcggtgacaagctcgacgtgatcatggtg
ccgaaggtcgagggcgcgcaggacatccactacgtcgaccggttgctcgcgcagctggaa
gcccgcgccggactgcggaaaccgttgctggtgcacgcgatcctggagacggcgagcggt
gtggcgaacgtcgaggagatcgccggggcgagtccgcgcatgcagggcatctcgctcggc
cccgcggacctcgcggcaagccgccgcatgaagaccacccgcgtcggcggcgggcatccg
ggctacctcgtgcgcaccgacccggtgggcgaggacctgcacgagggccgcaccacctcg
cagcaggacctgtggcactacacgatcgcgcgcatggtggacgcgtgcgtgctgcacggg
atcctgccgtactacgggccgttcggggacatccgcgacgtggtggcgtgcgaggaccag
ttccgcaacgcgttcctgctcggctgcgtcgggacctggtcgctgcacccggtgcagatc
gacatcgcgaagcgcgtgttctcgcccgcgccggaggacgtcgcgtgggcgcgccgggtg
atcgccgcgatgggggacggcaccggtgcggtcatgatcgacgggaagatgcaggacgac
gcgtcgttcaagcagtgccgggtggtggcggagctggcggacaagctggccgaacgtgac
ccggacctgagggcggcttacgacgaagcgacgaaggaggcgctggcgtga
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