Amycolatopsis bartoniae: AMYBAR_005778
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Entry
AMYBAR_005778 CDS
T10755
Symbol
crtI
Name
(GenBank) phytoene desaturase family protein
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar00906
Carotenoid biosynthesis
abar01100
Metabolic pathways
abar01110
Biosynthesis of secondary metabolites
Module
abar_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AMYBAR_005778 (crtI)
Enzymes [BR:
abar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
AMYBAR_005778 (crtI)
1.3.99.28 phytoene desaturase (neurosporene-forming)
AMYBAR_005778 (crtI)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
AMYBAR_005778 (crtI)
1.3.99.31 phytoene desaturase (lycopene-forming)
AMYBAR_005778 (crtI)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
Pyr_redox_2
FAD_binding_3
HI0933_like
FAD_binding_2
FAD_oxidored
GIDA
NAD_binding_9
Pyr_redox
MCRA
AlaDh_PNT_C
Pyr_redox_3
NAD_binding_7
Lycopene_cycl
Thi4
MurD-like_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
XMG36826
LinkDB
All DBs
Position
6123883..6125337
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AA seq
484 aa
AA seq
DB search
MRGDHVVVIGAGLAGLSAALHLLGAGRRVTLLEQDDRPGGRVSQHEYDGFTADTGATVLT
MPELLDEALAAVGEPNRLRLVRLDPAYHARFADGSAIAVHTDGDAMECEIREFAGPREAD
GYRRLRRWLTELYAAEKDRFIGANFDSPLDLARPELLKLLALGGFGRLGPRIGRFLGDDR
LRRLFSFQALYAGLHPRTALAAYGVIPYMDTIAGVYYPLGGMGRVGQVLADAAERAGADV
RFKTEAAWLERVSSRVRAVRTRAGERIPCDAVVLATELTTSYRLLGVRPKRLLPLRYSPS
AVVLHGKSERSWPELGHHTIFFGDAWERTFTEIIRDGRLMSDPSLLVTRPTATDPTLSAG
GQVVSVLAPAPNLRTGPVDWPRVGPAYRDELLRVLAHRGLTGFEEDYRVDEIVTPREWAE
RGMAAGTPFSLAHTFAQTGPFRPGNLVRGLENAVLAGCGTTPGVGIPPVLISGRLAAARI
TGPR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggggaccacgtggtcgtgatcggggccgggctcgccgggctgtcggcggcgctg
cacctgctcggcgcgggccgccgggtgacgttgctggagcaggacgaccggccgggcggg
cgcgtcagccagcacgagtacgacggcttcacggccgacaccggcgccaccgtgctgacg
atgccggagctgctcgacgaggcgctcgcggcggtcggcgaacccaaccggctccgcctc
gtgcggctggatccggcctaccacgcgaggttcgccgacggcagcgcgatcgccgtgcac
accgacggtgacgcgatggagtgcgagatccgggagttcgccgggccgcgcgaggccgac
ggctaccggaggctgcgccggtggctcaccgagctgtacgcggcggagaaggaccggttc
atcggcgcgaacttcgactccccgctcgacctcgcgcgcccggaactgctcaagctgctg
gcactgggcggtttcggccggctgggcccgcgcatcggccggttcctcggcgacgaccgg
ctgcgcaggctgttctcgttccaggccctctacgccgggctccacccgcgcacggcgctg
gccgcgtacggcgtcatcccgtacatggacacgatcgcgggggtgtactacccgctcggc
ggcatgggccgggtcgggcaggtgctcgcggacgcggccgagcgggcgggcgcggacgtg
cgcttcaagaccgaagccgcctggctggaaagggtttcctcgcgcgtgcgggcggtgcgc
actcgcgccggcgagcggatcccctgtgacgccgtggttctcgcgaccgagctgaccacg
tcctaccgcctgctgggggtccggccgaaacgcctgctgccgctgcggtactcgccctcg
gccgtggtgctgcacgggaagtccgagcgcagctggccggaactgggccaccacaccatc
ttcttcggcgacgcgtgggagcggacgttcaccgagatcatccgcgacgggcggctgatg
tccgatccctcgctgctggtgacccgcccgaccgccaccgacccgacactgtccgccggc
gggcaggtggtgtcggtgctggcgcccgcgccgaacctgcgcacgggacccgtggactgg
ccgcgcgtgggcccggcgtaccgggacgagctgttgcgggtgctcgcgcaccgcgggctg
accgggttcgaggaggactaccgggtggacgagatcgtgacgccgcgagagtgggccgag
cgggggatggcggcgggcacgccgttctcgctggcgcacaccttcgcgcagaccggtccc
ttccggccggggaacctggtgcgggggctggaaaacgcggtgctggcagggtgcgggacc
acgccgggcgtcggcatcccgccggtgctgatctcgggccgcctcgcggcggcgaggatc
accggtccgcggtag
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