Amycolatopsis bartoniae: AMYBAR_006989
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Entry
AMYBAR_006989 CDS
T10755
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
abar Amycolatopsis bartoniae
Pathway
abar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMYBAR_006989 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abar03400
]
AMYBAR_006989 (nth)
Enzymes [BR:
abar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AMYBAR_006989 (nth)
DNA repair and recombination proteins [BR:
abar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMYBAR_006989 (nth)
Prokaryotic type
AMYBAR_006989 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
C7_FIM2_N
Motif
Other DBs
NCBI-ProteinID:
XMG38014
LinkDB
All DBs
Position
complement(7449513..7450196)
Genome browser
AA seq
227 aa
AA seq
DB search
MLRCLTEEFPDAHAELDFTNPLELLVAVVLSAQTTDVRVNEVTPAVFARFKTAADYAAAD
RTELEELLRPTGFFRAKANSLMGLGAALVERYGGEVPDKLDELVTLPGVGRKTANVVLGN
AFGVPGITVDTHFGRLVRRWGWTSEEDPVKVEHAVGELIPRKEWTMLSHRVIFHGRRVCH
ARKPACGACPLARDCPSYGTGPTGFEEAAKLVKGPERDHILAMVQGS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttgcctcaccgaggaattccccgacgcgcacgcggagctcgacttcacgaac
ccgctcgagctgctcgtcgccgtggtgctctccgcgcagaccaccgacgtgcgcgtcaac
gaggtcacgcccgctgtcttcgcccggttcaagaccgccgccgactacgccgccgccgac
cgcaccgagctggaggagctgctgcggcccaccggcttcttccgcgcgaaggccaactcg
ctgatgggtctcggcgccgccctcgtcgaacgctacggcggggaggtgccggacaagctc
gacgagctcgtcaccctgccgggtgtcggccgcaagaccgcgaacgtcgtgctcggcaac
gccttcggcgtgcccggcatcaccgtcgacacccacttcggccggctggtgcgccggtgg
ggttggacgtccgaagaggacccggtgaaggtcgagcacgccgtcggggagctcatcccg
cgcaaggagtggacgatgctctcgcaccgggtgatcttccacgggcgccgcgtctgccac
gcccgcaagcccgcgtgcggcgcctgccccctggcgcgcgactgcccctcgtacggcacc
ggcccgaccgggttcgaggaggcggcgaagctggtcaagggtcccgaacgggaccacatc
ctggcgatggtgcagggctcgtga
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