Georhizobium profundi: D5400_00095
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Entry
D5400_00095 CDS
T05798
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
abaw
Georhizobium profundi
Pathway
abaw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D5400_00095 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abaw03400
]
D5400_00095 (nth)
Enzymes [BR:
abaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D5400_00095 (nth)
DNA repair and recombination proteins [BR:
abaw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D5400_00095 (nth)
Prokaryotic type
D5400_00095 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AZN69882
UniProt:
A0A3S9AZ37
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All DBs
Position
complement(16437..17207)
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AA seq
256 aa
AA seq
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MQKPKTPAGQIIASRSPRKPTRRSRYTKVELEEMFRRFQLQRPEPKGELEHVNPFTLVVA
VALSAQATDAGVNKATRALFKVADTPQKMLALGEDTVRDYIKTIGLFRNKAKNVIALSQK
LVDDFGGEVPMTREELVTLPGVGRKTANVVLSMAFGQATMAVDTHIFRIGNRIGLAPGKT
PDEVEEILMRVIPQPYLYHAHHWLILHGRYVCKARKPECERCIIADLCKSKEKTTDIPAP
IVELTQDIDAPTAEAI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcccaagacccccgccggacaaataatcgcgagccgcagtccccgcaaaccg
acgcggcgcagccgctacaccaaggtggagctggaggagatgttccggcgcttccagctg
cagcggcccgagccgaagggcgaactggagcacgtgaacccgttcacgctggtcgttgcc
gtggcgctctccgcgcaggcgaccgatgccggcgtgaacaaggcgacgcgggcgctcttc
aaggtggccgacacgccgcagaagatgctggcactcggtgaagacacggtccgcgactac
atcaagacgatcgggctattccgcaacaaggcgaagaacgtcatcgcgctcagccagaag
ctcgtcgacgacttcggcggcgaggtgccgatgacgcgggaagagctggtgacgctgccg
ggcgtcggccgcaagaccgcgaatgtggtgctctccatggcgttcggccaggcgacgatg
gcggtcgacacccacatcttccgcatcggcaaccgcataggcctcgcgcccggcaagaca
ccggatgaggtggaggagatcctgatgcgggtgatcccgcagccctatctctaccacgcg
catcactggctgatcctgcacgggcgctatgtgtgcaaggcccgcaagccggaatgcgag
cgctgcatcatcgccgatctctgcaaatcgaaggaaaagacaacggacattcccgccccg
atcgtcgaactgacgcaggatatcgacgctccgacggcagaagccatctga
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