Acinetobacter baumannii AB307-0294: ABBFA_02788
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Entry
ABBFA_02788 CDS
T00795
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abb
Acinetobacter baumannii AB307-0294
Pathway
abb03030
DNA replication
abb03410
Base excision repair
abb03420
Nucleotide excision repair
abb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABBFA_02788 (ligA)
03410 Base excision repair
ABBFA_02788 (ligA)
03420 Nucleotide excision repair
ABBFA_02788 (ligA)
03430 Mismatch repair
ABBFA_02788 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abb03032
]
ABBFA_02788 (ligA)
03400 DNA repair and recombination proteins [BR:
abb03400
]
ABBFA_02788 (ligA)
Enzymes [BR:
abb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABBFA_02788 (ligA)
DNA replication proteins [BR:
abb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABBFA_02788 (ligA)
DNA repair and recombination proteins [BR:
abb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABBFA_02788 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABBFA_02788 (ligA)
MMR (mismatch excision repair)
DNA ligase
ABBFA_02788 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABBFA_02788 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ATY45212
UniProt:
A0A5K6CTP6
LinkDB
All DBs
Position
complement(2978238..2980247)
Genome browser
AA seq
669 aa
AA seq
DB search
MRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVGGQAL
SKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGLAISLWYENG
VLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMPKSGFEKLNA
DQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLTTMHDSLQWL
TELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQQQLGFLSRE
PRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVTLHNIGEIHR
LDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVMPEGEALARC
SGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHLHEHRETLLG
IEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTLEALKAANVE
ALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLNGESWVLTGT
LEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPVMNETDFLSL
MAGYGQTLS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcttattcaactgattgcaaagcataaccatgcctactatgtcatggatcag
ccgacaatctcggacagtgaatacgatcatttatttcatcagttaaaagctttagaagaa
caatatccggaacttgtacaagccgactcaccaacaacgaaagtaggtggtcaggcgctt
tcaaaatttgagagtgtgacgcatgtggtgccaatgctttcacttggtaatgtatttaac
caagaagacttatttgcatttgcacgccgtgtagaagagcgacttccgaaccagaaagta
caatatgaagttgagttaaaactcgatggccttgcgatttcactatggtatgaaaatggt
gtactcgttcgcggtgtaacccgtggggatggcgaaacgggtgaagatattactcaaaat
gttaaaaccattcgtaacttacctaaagttctgcattcagaaaaatatgaaatacctcgt
ctacttgaagtacgtggcgaagtattgatgccaaagtctggttttgaaaaactcaatgct
gatcaagaagcaaagggagaaaaaaccttcgctaaccctcgaaatgcagccgcaggaagt
ttaagacaacttgatccaaatattgctgctgctcgacctttggcattttatgcgtatggg
attgcacagtgtgaaccgaatcatggcctgacaaccatgcatgatagcttgcaatggtta
acggaacttgggttccaaattgctgagcgtcagtacttgtgtaattcaattcaagaagta
cagcagcgctatgagcaaattcagcaagaacgtccaaacttgcaagttgaaattgatggc
atggtggtgaaggttgatgacctaaaacagcaacagcagcttggtttcttaagtcgtgaa
ccacgctgggcaactgcttataaattcccggcacaagctgcattaactacagttgagcag
attgactggcaagtagggcgtaccgggactttgacccctgtagcacgcttaaaccctgtt
tttgtgggtggtgtgactgtttctaacgtaacgttgcataatattggggaaattcatcgt
ctggatgtacgcattggcgatacggtaagtgtatatcgtacgggtgacgtgatccctaaa
gtagaaaaagtttggccggagttccgtcctgctgaagcagaagttgttcatttaccagag
tcctgcccagtatgtgcttcgcctgtagtgatgcccgaaggtgaggctctcgcacgttgt
tcaggcggtttatattgtgccgcacagcgtattgaagccattcgtcactttgtatcgcgt
aaagcgatggatatcgagggcttgggagatcgttgggtagaatctttattacgtctcgat
ttactcaaagatgttgctgatatttaccatttgcatgagcacagagaaactctcttgggc
atcgaaaaaatgggagaaaagtcagtacagaacctaatagatgcgattgaagcaagtaag
aaaacaactctagcacgttttatttatgcattaggtattcgtggagtaggtgaaacaacg
gctagaatgttagcaaatacatttcagacgctagaggcacttaaagctgcgaatgtagaa
gctttaaagaaaaccccagatgtaggggatattacagcagagtggattgcagactttttc
ttggcaccgcataacattgaagtactcgatcgtttaattgctgcaggaattcattgggat
gcaccaacagcaccaacgcgtcaacctttaaatggtgaaagctgggtacttacaggtaca
ttagagcaaatgacccgtgatcaggccactcaaatgctacaagcattaggtgcacgagta
agtgggagtgtttctagcaaaacgaaatgtgtagttgctggtgagaaggcgggttcaaaa
ttagaaaaagctgcaaagttaggtattcctgtcatgaatgaaacagatttcttatcactc
atggcaggctatgggcaaactttgagctaa
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