Acinetobacter baumannii TCDC-AB0715: ABTW07_0789
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Entry
ABTW07_0789 CDS
T01908
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abd
Acinetobacter baumannii TCDC-AB0715
Pathway
abd03030
DNA replication
abd03410
Base excision repair
abd03420
Nucleotide excision repair
abd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABTW07_0789 (ligA)
03410 Base excision repair
ABTW07_0789 (ligA)
03420 Nucleotide excision repair
ABTW07_0789 (ligA)
03430 Mismatch repair
ABTW07_0789 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abd03032
]
ABTW07_0789 (ligA)
03400 DNA repair and recombination proteins [BR:
abd03400
]
ABTW07_0789 (ligA)
Enzymes [BR:
abd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABTW07_0789 (ligA)
DNA replication proteins [BR:
abd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABTW07_0789 (ligA)
DNA repair and recombination proteins [BR:
abd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABTW07_0789 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABTW07_0789 (ligA)
MMR (mismatch excision repair)
DNA ligase
ABTW07_0789 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABTW07_0789 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
5_3_exonuc
zf-C2H2_ZFAND2
Motif
Other DBs
NCBI-ProteinID:
ADX91225
LinkDB
All DBs
Position
886047..888056
Genome browser
AA seq
669 aa
AA seq
DB search
MRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVGGQAL
SKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGLAISLWYENG
VLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMPKSGFEKLNA
DQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLTTMHDSLQWL
TELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQQQLGFLSRE
PRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVTLHNIGEIHR
LDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVMPEGEALARC
SGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHLHEHRETLLG
IEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTLEALKAANVE
ALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLNGESWVLTGT
LEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPVMNETDFLSL
MAGYGQTLS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcttattcaactgattgcaaagcataaccatgcctactatgtcatggatcag
ccgacaatctcggacagtgaatatgatcatttatttcatcagttaaaagctttagaagaa
caatatccggaacttgtacaagccgactcaccaacaacaaaagtaggtggtcaagcgctt
tcaaaatttgagagtgtgacgcatgtggtccccatgctttcacttggtaatgtatttaac
caagaagacttatttgcatttgcacgccgtgtagaagagcgacttccgaaccagaaagta
caatatgaagttgagttaaaactcgacggccttgcgatttcactatggtatgaaaatggt
gtacttgttcgcggtgtaacccgtggggatggcgaaacgggggaagacattactcaaaac
gttaaaactattcgtaacttacctaaagttctgcattcagaaaaatatgaaatacctcgt
ctacttgaagtacgtggtgaagtattgatgccaaagtctggttttgaaaaactcaatgct
gaccaagaagcaaagggagaaaaaaccttcgctaaccctcgaaatgcagccgcaggaagt
ttaagacaacttgatccaaatattgctgctgctcgacctttggcattttatgcgtatggg
attgcacagtgtgaaccgaatcatggcctgacaaccatgcatgatagcttacaatggtta
acggaacttgggttccaaattgctgagcgtcagtacttgtgtaattcaattcaagaagta
cagcagcgctatgagcaaattcagcaagaacgtccaaacttgcaagttgaaattgatggc
atggtggtgaaggttgatgacctaaaacaacaacagcagcttggtttcttaagtcgtgaa
ccacgctgggcaactgcttataaattcccggcacaagctgcattaactacagttgagcag
attgactggcaagtagggcgtacagggactttgacccctgtagcacgcttaaaccctgtt
tttgtgggtggtgtgactgtttctaacgtaacgttgcataatattggggaaattcatcgt
ctggatgtacgcattggcgatacggtaagtgtatatcgtacgggtgacgtgattcctaaa
gtagaaaaagtttggccggagttccgtcctgctgaagcagaagttgttcatttaccagag
tcctgcccagtatgtgcttcgcctgtagtgatgcctgaaggtgaggctctcgcacgttgt
tcaggcggtttatattgtgccgcacagcgtattgaagccattcgtcactttgtatcgcgt
aaagcgatggatatcgagggcttgggagatcgttgggtagaatctttattacgtctcgat
ttacttaaagatgttgctgatatttaccatttgcatgagcacagagaaactctcttgggc
atcgaaaaaatgggagaaaagtcagtacagaacctaatagatgcgattgaagcaagtaag
aaaacaactctagcacgttttatttatgcattaggtattcgtggagtaggtgaaacaacg
gctagaatgttagcaaatacatttcagacgctagaggcacttaaagctgcgaatgtagaa
gctttaaagaaaaccccagatgtaggggatattacagcagagtggattgctgactttttc
ttggcaccgcataacattgaagtactcgatcgtttaattgccgcaggaattcattgggat
gcaccaacagcaccaacgcgtcaacctttaaatggtgaaagctgggtacttacaggtaca
ttagaacaaatgacccgtgatcaggccactcaaatgctacaagcattaggtgcacgagta
agtgggagtgtttctagcaaaacaaaatgtgtagttgctggtgagaaggcgggttcaaaa
ttagaaaaagctgcgaagttaggtattcccgtcatgaatgaaacagatttcttatcactc
atggcaggctatgggcaaactttgagctaa
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