Trichophyton benhamiae: ARB_06395
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Entry
ARB_06395 CDS
T01611
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
abe
Trichophyton benhamiae
Pathway
abe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ARB_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abe03041
]
ARB_06395
Spliceosome [BR:
abe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ARB_06395
Complex C
U5 SnRNP specific factors
ARB_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
SRPRB
DUF5505
Motif
Other DBs
NCBI-GeneID:
9520996
NCBI-ProteinID:
XP_003015272
UniProt:
D4AQ88
LinkDB
All DBs
AA seq
1012 aa
AA seq
DB search
MTFMTSKFSRDGLNMDITAITPAAQIESKLIVSRFGNYIGGEESEEESQHGGVEAQQFDY
DLESEVEAPAAHGQELMEIDDQGPSNAVILHEDKQYYPTAQQVYGADVETKVQEEDTQPL
SQPIIAPVQQKKFAVQEADLPPVFYSREFMTDLLNYPSQTRNIALAGHLHHGKTAFMDTL
VMETHDLSEKLDKRTGKSKDEQLRYTDVHFLERERGLSIKSAPMSLVLQGTKGKSHLFNI
IDTPGHVNFVDEVAASLRLVDGVVLVVDVVEGVQINTEQIIKHAVLEDLPLTLIVNKLDR
LILELKLPPTDAYFKLKHVVEEVNTVIERTIPGQGEKRRLSPEKGNVAFACASMNWCFTL
QSFAKMYADTYAKVDLSEFAIRLWGDIFFNPRSRKFTRKGMEEQSKRSFVHFILEPIYKL
YSHTISESPEDLKDTLATLGINLKPSQLKSDAKVLLKLVCAQFFGPVTGFVDMVVQHIPS
PVDGASKKLDKYYTGPRDTKVAAAMEACDQDGPLVVHVTKLYGTPDAAGFNAFGRIMSGT
ARAGQQVRVLGEGYTVDDNEDMVVATISDTFIAESRYNIPTSGVPAGNWVLLSGVDNSII
KTATLVPLKLEDDEEAYIFKPIKHMTESVFKVAVEPINPSELPKMLEGLRKVNKSYPLIS
TRVEESGEHIVLGTGELYMDCVLHDLRRLYAEMELKVSDPVTRFCETVVETSAIMCYSVT
ANTKNKITMIAEPLDDGISEDIESGRVNIHDPIRKVGQFFEEKYDWDKLAARSIWAFGPD
DMGPNILQDDTLPSKVDKKLLGSVRDFIRQAFSWGTREGPLCEEPIRNTKFRLTDIQLAD
QAFSRGGGQIIPATRRVIYSSFLMASPRLMEPIYTCAMTGPPDSVAAIYTVLSRRRGHVL
SDGPIAGTPLYSVRGLIPVIDSFGFETDLRIHTQGQATVSLVFDKWSVVPGDPLDRDIKL
RPLEMASPMATARDFVLKTRRRKGLAEDITVSKFLEPELWKGLKESGILGET
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacctttatgacgagtaagttttctagagatggattaaatatggatataacggcaatt
actccagctgcgcaaatagaaagcaagctaattgtatccaggttcggcaattatattgga
ggtgaagagtccgaggaagaatcgcaacatggcggcgttgaggcacagcaatttgattat
gaccttgaatcggaagtggaagccccggctgctcatggccaggagctcatggagatagat
gaccaaggtccatcgaatgcagtgattcttcacgaagacaagcaatattacccaactgca
caacaagtttacggcgcagatgtcgagacgaaagtacaagaagaagatacacagccactg
tcacaaccaattatcgcgccagttcagcagaagaagtttgctgtccaggaagcagatcta
ccaccggtcttttactctagagagttcatgacagatctattaaactaccctagccaaact
cgaaatatagcattggccggtcatttgcatcatggaaagacagcctttatggatacattg
gttatggagacgcacgatctgtcggaaaaacttgataaacgaactggtaaatctaaggat
gaacagctgagatacacagatgtgcactttctagagagagagcgtggactgtcaataaaa
tcagcaccgatgagccttgttttacaaggtacgaaagggaaatctcatctcttcaacata
atcgatacccccgggcatgtcaatttcgtggacgaagtcgccgcgtcattgcgactggta
gacggagtagtgcttgttgtggacgtggttgaaggcgtccagatcaacacggaacaaatc
atcaagcacgccgtattagaagacctgccactcactctaattgttaacaagctggaccga
ctcatactggagttaaaactaccaccaacggatgcctacttcaagttgaagcatgtggtt
gaggaggtaaacactgttatcgagagaacaatacctgggcaaggagaaaagagacggcta
agccccgagaagggcaacgttgcatttgcatgtgcctcgatgaactggtgttttaccctc
cagtcattcgcaaaaatgtatgcggacacatatgcgaaagttgatctctccgagtttgct
ataagactatggggtgatatattcttcaatcctcgcagccgcaagtttacgcgcaagggt
atggaagaacaatcgaagcgatcctttgtccatttcatccttgaacctatctacaagctt
tactcccataccatcagtgagagcccggaagatctgaaagatacgctcgcaacgcttgga
atcaacttaaaaccatcccagctgaaatccgacgcaaaggtgctcttaaaactagtttgt
gcccagttctttggccctgtcactgggtttgtcgatatggtcgttcagcacatcccttct
cctgtcgacggggctagcaaaaaactggataagtactatactgggccacgagatacaaaa
gttgctgctgccatggaagcctgtgatcaagatggtccattagttgtgcatgtcactaag
ttgtatggaacaccagatgctgccgggttcaatgcctttgggcgcatcatgagcggaact
gcaagggcaggacagcaggtcagagtactaggagaagggtatacagtggatgataatgag
gatatggtcgttgcaaccatttctgacacgttcatcgccgagtcccgctataacattcct
accagtggcgtcccagcgggtaactgggtgctcctcagcggagtagataactccatcatc
aaaactgcaactcttgttccgttgaaacttgaagatgacgaggaagcatatatatttaag
cctatcaagcatatgacagagtctgtgttcaaggtggctgttgaacccataaatccatca
gagctacctaagatgctcgagggacttcggaaggttaacaaaagctatcctctgatatct
acaagagttgaggaatcaggtgaacatattgtactgggcactggggagctctacatggat
tgtgttctgcatgacctccgtcgactatacgcggaaatggaacttaaggtatcagacccg
gttacaagattttgtgaaaccgttgttgaaacctccgccattatgtgctattccgtcaca
gccaacactaagaacaaaatcacgatgattgcagaacctctcgatgatggtatcagtgaa
gatatcgagagtggtcgtgtcaacattcacgatccaattcgaaaagtcggtcaattcttt
gaagaaaaatatgattgggataaactagccgcaaggagtatttgggcttttggccctgat
gatatgggaccaaatattcttcaggacgacacattgccttccaaggtagacaagaaacta
cttgggtcagtaagggactttattcgccaggcttttagctggggaacgagggagggcccc
ttgtgtgaagaacccattcgaaacaccaagttccgtcttacagatatccaactagctgac
caagccttttctcgaggcggtgggcagatcatcccggccactcgtcgcgttatctactcg
tcattcctcatggcctctccccgattgatggaacccatttatacctgtgctatgacaggt
cctccagactcagtcgccgccatatacactgtcctctctcgtcgacgtgggcacgtctta
tccgatggtcctatcgcaggaactcctctttattctgttcgaggacttattcccgtcatt
gactccttcggttttgagaccgatctcagaatccatacccagggtcaggcaactgtcagt
ttagtatttgacaaatggagtgttgtgccgggagacccattggacagagatatcaaactc
cggccgctggagatggcaagtcccatggcaactgcaagagattttgttctcaaaactcgc
cgaagaaagggtcttgcagaagatatcaccgttagcaagtttttggaaccggagctttgg
aaaggtttgaaggagagcggtatcctcggcgaaacatga
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integrated database retrieval system