Acinetobacter baumannii AB0057: AB57_0851
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Entry
AB57_0851 CDS
T00793
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abn
Acinetobacter baumannii AB0057
Pathway
abn03030
DNA replication
abn03410
Base excision repair
abn03420
Nucleotide excision repair
abn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB57_0851 (ligA)
03410 Base excision repair
AB57_0851 (ligA)
03420 Nucleotide excision repair
AB57_0851 (ligA)
03430 Mismatch repair
AB57_0851 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abn03032
]
AB57_0851 (ligA)
03400 DNA repair and recombination proteins [BR:
abn03400
]
AB57_0851 (ligA)
Enzymes [BR:
abn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AB57_0851 (ligA)
DNA replication proteins [BR:
abn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB57_0851 (ligA)
DNA repair and recombination proteins [BR:
abn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AB57_0851 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB57_0851 (ligA)
MMR (mismatch excision repair)
DNA ligase
AB57_0851 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB57_0851 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
5_3_exonuc
zf-C2H2_ZFAND2
Motif
Other DBs
NCBI-ProteinID:
ACJ40649
UniProt:
B7I790
LinkDB
All DBs
Position
912400..914436
Genome browser
AA seq
678 aa
AA seq
DB search
MAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSP
TTKVGGQALSKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGL
AISLWYENGVLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMP
KSGFEKLNADQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLT
TMHDSLQWLTELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQ
QQLGFLSREPRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVT
LHNIGEIHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVM
PEGEALARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHL
HEHRETLLGIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTL
EALKAANVEALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLN
GESWVLTGTLEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPV
MNETDFLSLMAGYGQTLS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacttccgtgatcgaacagatgcgtcagcttattcaactgattgcaaagcat
aaccatgcctactatgtcatggatcagccgacaatctcggacagtgaatacgatcattta
tttcatcagttaaaagctttagaagaacaatatccggaacttgtacaagccgactcacca
acaacgaaagtaggtggtcaggcgctttcaaaatttgagagtgtgacgcatgtggtgcca
atgctttcacttggtaatgtatttaaccaagaagacttatttgcatttgcacgccgtgta
gaagagcgacttccgaaccagaaagtacaatatgaagttgagttaaaactcgatggcctt
gcgatttcactatggtatgaaaatggtgtactcgttcgcggtgtaacccgtggggatggc
gaaacgggtgaagatattactcaaaatgttaaaaccattcgtaacttacctaaagttctg
cattcagaaaaatatgaaatacctcgtctacttgaagtacgtggcgaagtattgatgcca
aagtctggttttgaaaaactcaatgctgatcaagaagcaaagggagaaaaaaccttcgct
aaccctcgaaatgcagccgcaggaagtttaagacaacttgatccaaatattgctgctgct
cgacctttggcattttatgcgtatgggattgcacagtgtgaaccgaatcatggcctgaca
accatgcatgatagcttgcaatggttaacggaacttgggttccaaattgctgagcgtcag
tacttgtgtaattcaattcaagaagtacagcagcgctatgagcaaattcagcaagaacgt
ccaaacttgcaagttgaaattgatggcatggtggtgaaggttgatgacctaaaacagcaa
cagcagcttggtttcttaagtcgtgaaccacgctgggcaactgcttataaattcccggca
caagctgcattaactacagttgagcagattgactggcaagtagggcgtaccgggactttg
acccctgtagcacgcttaaaccctgtttttgtgggtggtgtgactgtttctaacgtaacg
ttgcataatattggggaaattcatcgtctggatgtacgcattggcgatacggtaagtgta
tatcgtacgggtgacgtgatccctaaagtagaaaaagtttggccggagttccgtcctgct
gaagcagaagttgttcatttaccagagtcctgcccagtatgtgcttcgcctgtagtgatg
cccgaaggtgaggctctcgcacgttgttcaggcggtttatattgtgccgcacagcgtatt
gaagccattcgtcactttgtatcgcgtaaagcgatggatatcgagggcttgggagatcgt
tgggtagaatctttattacgtctcgatttactcaaagatgttgctgatatttaccatttg
catgagcacagagaaactctcttgggcatcgaaaaaatgggagaaaagtcagtacagaac
ctaatagatgcgattgaagcaagtaagaaaacaactctagcacgttttatttatgcatta
ggtattcgtggagtaggtgaaacaacggctagaatgttagcaaatacatttcagacgcta
gaggcacttaaagctgcgaatgtagaagctttaaagaaaaccccagatgtaggggatatt
acagcagagtggattgcagactttttcttggcaccgcataacattgaagtactcgatcgt
ttaattgctgcaggaattcattgggatgcaccaacagcaccaacgcgtcaacctttaaat
ggtgaaagctgggtacttacaggtacattagagcaaatgacccgtgatcaggccactcaa
atgctacaagcattaggtgcacgagtaagtgggagtgtttctagcaaaacgaaatgtgta
gttgctggtgagaaggcgggttcaaaattagaaaaagctgcaaagttaggtattcctgtc
atgaatgaaacagatttcttatcactcatggcaggctatgggcaaactttgagctaa
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