Acinetobacter bouvetii: ACBO_06830
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Entry
ACBO_06830 CDS
T07603
Symbol
ligA_2
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abou
Acinetobacter bouvetii
Pathway
abou03030
DNA replication
abou03410
Base excision repair
abou03420
Nucleotide excision repair
abou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACBO_06830 (ligA_2)
03410 Base excision repair
ACBO_06830 (ligA_2)
03420 Nucleotide excision repair
ACBO_06830 (ligA_2)
03430 Mismatch repair
ACBO_06830 (ligA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abou03032
]
ACBO_06830 (ligA_2)
03400 DNA repair and recombination proteins [BR:
abou03400
]
ACBO_06830 (ligA_2)
Enzymes [BR:
abou01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACBO_06830 (ligA_2)
DNA replication proteins [BR:
abou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACBO_06830 (ligA_2)
DNA repair and recombination proteins [BR:
abou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACBO_06830 (ligA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACBO_06830 (ligA_2)
MMR (mismatch excision repair)
DNA ligase
ACBO_06830 (ligA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACBO_06830 (ligA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
RNA_lig_T4_1
5_3_exonuc
GST_C_3
Motif
Other DBs
NCBI-ProteinID:
BCU63892
LinkDB
All DBs
Position
742028..744052
Genome browser
AA seq
674 aa
AA seq
DB search
MTQQNTVVAQMRQLIQILAKHNHAYYVMDQPTIADSEYDQLFHQLKALEEQHPDLVQPDT
PTNTVGAKPLSKFANVTHAVPMLSLGNVFNEEDLYAFARRAEERLPNQKIEYDVELKFDG
LAISLWYEHGILVRGVTRGDGETGEDITQNVKTIRNLPKVLSSEKTAVPELLEVRGEVLM
PKAGFEKLNAENEAKGEKTFANPRNAAAGSLRQLDPAIAASRPLAFYAYGIAQCEPNHGQ
STMSASLEWLTQFGFAVGERHFICDNIQDVQAAYEQINAERPNLSVEIDGMVIKVNDLKQ
QQTLGFLSREPRWATAYKFPAVAALTTVENIDWQVGRTGTLTPVARLNPVAVGGVTVSNV
TLHNIGEIHRLDVRIGDTVSVYRSGDVIPKVEKVWPEFRPNDAVEVHLPECCPVCSSPVV
MPEGEALARCSGGLYCAAQRIEAIRHFVSRKALDIEGLGDRWVESLLHLDLLQNVADIYS
LHEHREQLLTIEKMGEKSVQNLIDSIENSKKTTLAAFIYALGIRGVGETTARMLANTFQT
LDALRNADIEALKKTPDVGEITAEWIVDFFQAPHNLEVVDRLLAAGIHWDAPAAPTRQPL
NGESWVITGTLSTMGRDEATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAEKLGVQ
VMTEAEFLEFVQQY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcaaaacactgttgttgcgcaaatgcgccaactgattcaaattctggccaag
cataatcatgcttactatgtgatggatcagccgacaattgctgacagtgaatatgaccag
ttatttcaccagcttaaagcattggaagagcagcatcctgatttagtgcagcctgatacg
ccgacgaatacggtaggcgcaaagccgttatccaagtttgccaatgtgacgcatgcggtg
cccatgctgtctttaggcaatgtgttcaatgaagaagatttatatgcctttgcgcgccgc
gcagaagagcgtttgccgaatcagaaaattgaatatgatgttgaactgaagtttgacggc
ctggcgatttcactgtggtatgagcatggcattttagtccgtggcgtaacgcgcggcgat
ggtgaaacaggagaagatattacccaaaatgtgaaaaccatccgcaatttgcctaaagtc
ttaagttcagaaaaaacagcggtgcctgaactgctggaagtgcgcggtgaagtcttgatg
cccaaagcgggctttgaaaagttaaatgcagaaaatgaagccaagggcgaaaaaaccttt
gccaatccgcgcaatgcggcagccggcagcctgcgccagctcgatcctgcaattgcggcc
tcgcggcctttggcattttatgcctacggcatcgcgcaatgtgagccgaatcatggccaa
agcaccatgtccgcgagtctggaatggctgacccagtttggttttgcagtcggtgaacgc
cactttatttgtgacaatattcaagatgtgcaggccgcttatgagcagatcaatgccgaa
cgtccaaatctcagtgttgaaatagatggcatggtgattaaggtgaatgatctgaaacag
cagcagactttaggctttttaagccgggagccgcgctgggcgaccgcttataaatttcct
gctgtggcggccttgaccacggtggagaatattgactggcaagtgggccgtacaggcacc
ttaaccccggtagcgcgcttgaatcctgttgccgtaggcggtgtaactgtttcgaatgta
accttgcacaatatcggtgaaattcaccgtctggatgtacgcattggcgatacggtcagt
gtataccgcagcggcgatgtgattccgaaggtggaaaaggtttggcctgaattccgccca
aatgatgctgtagaagtgcatttgcctgaatgctgcccagtctgttcatcgcctgtggtg
atgccggaaggggaagcattggcgcgctgttcaggcggcctgtactgcgcggcgcagcgt
attgaggcgattcgccactttgtttcacgcaaggctttggatatagagggcttgggcgac
cgctgggtagagtcgctgctgcatttggatttgctgcaaaatgtggcggatatttacagc
ctgcacgaacatcgtgaacagctgctgaccattgaaaagatgggggaaaagtcggttcag
aatttaatagattcgattgagaacagcaagaaaaccacactggcagctttcatttatgcc
ctaggcatccgtggggtaggtgaaaccacggcacgcatgctggccaatacgtttcagact
ttggatgcgctgcggaatgcggatattgaagcgttgaagaaaacccctgatgtcggcgag
atcaccgcagaatggattgtagatttctttcaggcgccgcacaatcttgaagtggttgac
cgcctgctggcggcaggcatccattgggatgcgccagccgcgccaacccgtcagccttta
aatggcgaaagctgggtgataactggaactttaagcaccatgggccgtgatgaggcgact
caaatgctgcaggctttaggcgcgcgggtcagcggcagcgtatccagcaaaaccaaatgc
gttgtcgcaggcgaaaaagcgggttcaaaactggaaaaagctgagaaattaggtgtacag
gtcatgacggaagctgaatttttagaatttgtgcagcagtattaa
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