Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT118386
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Entry
AGABI1DRAFT118386 CDS
T03136
Symbol
AGABI1DRAFT_118386
Name
(RefSeq) hypothetical protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abp03019
]
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
03032 DNA replication proteins [BR:
abp03032
]
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
Messenger RNA biogenesis [BR:
abp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
mRNA cycle factors
Common to processing body (P body) and stress granule
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
DNA replication proteins [BR:
abp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
AGABI1DRAFT118386 (AGABI1DRAFT_118386)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_4
EST1_DNA_bind
Motif
Other DBs
NCBI-GeneID:
18825437
NCBI-ProteinID:
XP_007326856
JGI:
Agabi_varbur_1_118386
UniProt:
K5X546
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MYIGLSGGGGSPRKGKDREMPLRDAPQPTDLDSRLTALRRKQAGTMRPKERPERTPVQST
TPYSLPPPSQPAPRHDRSPKQPATPTRAAVPQLHRRHAPQVVVSKPPDEADHEGFSRLKI
TTTPRPNMSKPKLFNPDADPIPMRHTAEPEPMSDSDSSHVPRNAPTTRNNGTNAARQLFD
HRRHDPLHFNVLSRPQQTNERSAPTPKSSGDYISAGSTSSYAASLSSSNFTLSTDGSSMS
SAVFDNRPGHTATDDSSASAFSQQLKLIYRRITTLESKVQQDDSDEQDEMDSRVMLKGQE
LTREDIENEKWRRKVDDHKSLAEDMYNLLQLSLAPSVPASLKHVPTKYNIVVRLWTHGFY
KLLESLRRSCFTSRLALELLQEFIYYSYTFYIGLVEDPTLNSFRSGWLEALGDLARYRMI
VATMLESGMGTKGSRLTTSALQAADEMNRVNGLDIPVIGTANGNSTGQKSFSNAHAGRVA
SQPPSVGVAAARLLEVEPDRERWRSIARDWYATGLFEQPGTGKLHHHLGLLYREVESEEM
RGVYHFVKSMTTLHPFMTSRESILPLWSGSMQTRRMNPDAKVSELFVLLHGMLFTNIQLD
DFKPTAARFLERLVIEGAEEREWIMMAIINISSVLEYGKPSGLLRRMGGIGGRETGRIIA
KKQATPTDNKMEVDDEGQQSTSPTLSEAGQHLETSPAFKYALQLTFAMLSFVLRNPTRRA
TEFSRSSLNPYLTTILTFLSTVLKHAPSLALLERSIPWDDLTTFFSSIPRKVMESQGLFS
VVDVTPEQRWPMLTTGCAPPLPEDWCMRGMEWVSRKVFERGYWKMGEDRPEVEVLETRES
DQMTDGQIEDDGDERKGQHFYGVRAEGPGDMSGIPTCAGWRVSPKETTMKRWGRIVRGAV
DIAGTVPGFNWTQGTREWRVEGKLADKVAAWKEMDRKEREEEEKRRTGRRWLDEDELMDV
DEEDSEEGSSEDDENDTEEVKELKARRRYLRSLILSGQQEQVSNPPRSRRARTSRRAHDN
YPELHIAQGYSVLVIDTNILLSFLPTVASLVESLVWTIVIPLPVVMELDGLVNNLSELGQ
AAQSAMKYITSHLRSHSISLKVQTSKGNYLPTLNVRTEEVDFAPGNFERSMDDLILKAAI
WQDEHWMDRSALLGSSSQDTNGAVKVVLLSLDRNLRLKARSRQLPAAGEKDLAALLAKPA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatataggattatccggtggcggtgggagtccgcgcaagggcaaggaccgcgaaatg
cctctccgcgacgccccccagcccaccgacctcgacagcagactgactgctcttaggcgc
aagcaggccggcacaatgcgacccaaggagcgtccagagcgcacaccagtacagtctaca
acaccctactcgttgccgccgccttcccaacccgcacctcggcacgaccggtcgccgaaa
cagcccgcaacacccacccgcgccgcagtccctcaattacaccgccgtcatgctccccag
gtcgtggtttcaaaacccccagacgaagcagaccacgagggattttctcgtcttaagatt
accaccaccccccgccctaatatgtccaaaccgaagcttttcaacccagatgcagaccct
attcctatgcgccacaccgcagagccagagcccatgtccgattctgacagctcgcacgtt
cctcgcaatgccccgactactcgcaacaacggtactaatgctgctcgtcagctttttgat
catcgtcgtcacgatcccctccatttcaatgtgctttctcgaccacaacagaccaacgaa
cgctctgcaccaacacctaaatccagtggagattacatctctgctggctccactagctca
tatgccgcatcactctcctcgtctaattttactctatctacggacggatcctcaatgtcg
tccgccgtttttgataatcggcccggtcacactgcaactgacgactcttccgcttctgcc
ttttcacaacaactcaaattaatatatcgcagaatcaccaccctggagtccaaggttcag
caggatgactctgatgagcaggacgaaatggactctcgtgtgatgctcaaaggtcaagaa
ctgacgcgggaagacattgaaaacgagaaatggaggagaaaagtggacgaccataaaagt
ttggcagaggacatgtacaacctgttacagctctctctcgccccttctgttcccgcttct
ctcaaacatgtgcccaccaagtataacatcgttgtacgattgtggactcacggcttttat
aagcttctcgaatcacttcgccgctcctgctttacgtcccgccttgcactcgaactcctc
caggagtttatctattattcgtatacgttctatataggtctagttgaagatccaaccctc
aactcatttcgaagcggatggctcgaggctcttggcgatctcgctcgctatcgcatgatc
gttgcgactatgctagagtctggaatgggaacaaagggtagccgcctaacgacatccgct
ttacaagccgccgacgagatgaaccgggtgaatggactcgacatccccgtgataggcacc
gccaacggtaacagtactggtcaaaagtcgttcagcaatgcacacgcaggacgcgttgct
agccaacctccaagtgttggtgtcgccgcagctcggctactggaagttgaacctgacagg
gagagatggagaagtatcgctagggattggtatgcaacgggcttattcgaacaacccggt
accggaaagttacaccatcatctgggtttactctaccgtgaggtggagagcgaagagatg
cgaggtgtataccactttgtgaaaagcatgacaactcttcaccctttcatgacctcccgt
gaatctatccttcctttgtggagcggctccatgcaaacgcgtcgcatgaatcccgatgcg
aaggtttccgaacttttcgtccttcttcacggaatgctcttcacaaacattcaactcgat
gatttcaagccaactgctgcgcggttcctcgagagacttgtcatcgaaggtgcggaagag
cgagagtggataatgatggccataatcaacatctcctccgtcctcgaatacggcaagccc
tccggactgcttcgacgaatgggtggtatcggaggtcgtgagactggtcgcatcattgcc
aaaaagcaggcgactcctacagacaacaagatggaggttgatgatgagggtcagcagtca
acttccccgacgctttcagaggcagggcaacatttagaaacttcgcctgcattcaagtac
gcgcttcaattgacattcgctatgctaagctttgttctacgaaatcctacacgacgagca
accgagttttctcggtcgtcccttaatccgtatctcaccacaatcctcactttcctctcc
acggtgcttaagcacgcaccctctcttgccctcttggagcgaagtataccctgggatgac
ctcaccacattcttctccagtatcccgcgaaaggttatggagtcgcagggtcttttcagt
gttgtcgacgtaacgcccgaacaacgctggcctatgctcacaacgggatgtgctccaccc
ctacctgaggattggtgtatgcgtggtatggagtgggtaagcaggaaagtcttcgaacgg
ggctattggaagatgggtgaagatcgtcctgaagtggaagtattggaaactcgcgaaagt
gatcagatgactgacggtcaaatcgaagatgacggggatgagcggaagggtcaacatttc
tatggagtcagagcggaaggtcctggtgatatgagtgggattccaacctgcgcagggtgg
cgtgttagtccgaaggaaacgacaatgaaacgttggggacgtattgtgcgaggcgccgtc
gatattgcgggaactgttcctggcttcaattggactcaaggtacacgtgagtggagagtc
gaaggaaaactcgcagacaaggttgctgcgtggaaagagatggataggaaagaacgagag
gaagaggagaagaggagaacgggaaggcgatggctcgacgaagatgagctcatggatgtt
gatgaagaggatagtgaggagggtagcagcgaagacgacgaaaatgatactgaagaggta
aaagagcttaaggctcgtcgtcggtatcttcgtagcctcatcctgtcaggacaacaggaa
caggtgtcaaatccaccgcgttctcgtcgggctcgtacctcaagacgtgctcacgacaat
taccccgagcttcacatcgcgcaaggctattctgtccttgttattgatacaaacatcctc
ctctcttttcttcccacggtggcttctctggtggaaagtttggtctggacaattgtcatc
ccccttcccgtcgtcatggaactcgacggcctggtgaataatctttcagagcttggtcag
gctgctcaaagcgccatgaaatacatcacatctcacctacgttctcactccatttctctc
aaagtacaaacctcgaaaggcaattacctgcccacgctgaatgtcaggacagaggaagtt
gactttgcccctggcaactttgagagaagtatggacgacttgattctcaaggccgctatt
tggcaggatgaacattggatggatcgatctgctcttttaggatcaagcagtcaagacaca
aatggtgccgttaaggtcgtgcttctgagtcttgaccgcaacttgcgccttaaggcacga
tcgcgtcagcttcccgccgcaggcgagaaagacctagccgcgctcctggccaagcccgcc
taa
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integrated database retrieval system
