Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT31552
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Entry
AGABI1DRAFT31552 CDS
T03136
Symbol
AGABI1DRAFT_31552
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
abp
Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
abp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGABI1DRAFT31552 (AGABI1DRAFT_31552)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
abp03041
]
AGABI1DRAFT31552 (AGABI1DRAFT_31552)
Spliceosome [BR:
abp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AGABI1DRAFT31552 (AGABI1DRAFT_31552)
Complex C
U5 SnRNP specific factors
AGABI1DRAFT31552 (AGABI1DRAFT_31552)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Dynamin_N
SRPRB
Motif
Other DBs
NCBI-GeneID:
18828967
NCBI-ProteinID:
XP_007324924
JGI:
Agabi_varbur_1_31552
UniProt:
K5WBE8
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MASLEDYDEFGNYIGADLDSDAEDEELNQGQYAPQPSGAPAPLEGFDDEPMQEPENEMAL
MEVDDEPRHKAVVLHEDKQYYPTAGELYGADVETLVQEEDAQPLSEPIVAPIKIRRWTVE
EKDMPETRFDKGFLLNMTAFPEMIRNVAVVGHLHHGKTALMDMLVFETHKLIWDADKPTR
YTDTHVLSREREISIKSSPMSLVLQTTSGKSHLLHLIDTPGHVNFLDEVAAAIRLADGIL
LVVDVVEGLMVGAEYIIRHALQENLKITLVVNKIDRLILELRIKPADAYYKIKHTIEEIN
TFISNIDPDPELRLSPENGNVAFASTDMNYCFTLRSFAKLYADTYGKLDVNAFAARLWGD
IYFDEESRRFTRKQSDPEQNRTFIHFILNPLYKIYSNVLSEDTDALRETLASLGITLKPV
IYKMDVRPLLKVVLDQFFGSSTGLVDVIVEHIPSPVENAANKVEGIYTGPQTSELAVSMK
SCDPEGPVMVHITKLYHTTDAQSFRAFGRVISGTLRKGAEIKVLGEEYSPEDEEDMMKAT
VEDLWISEARYFIPAEEVAAGNLILIGGVDASISKTATIASTSIDDDLYIFRPMKHMTES
VLKVAIEPIAPSELPKMLAGLRSINKSYPLISTKVEESGEHVMIGTGELYLDCVMHDLRR
LFSEIEIKVSDPVTKFCETVLETSALKCYADTPNKKNKITMIAEPLERGIAEDIERGRVT
MKMTAKDRGKFFEEKYQWDLLASRSIWAFGPYDNGPNVLLDDTLPSQVDKKLLGTIKEHI
KQGFQWGAREGPLCDEPMRNVKFRLLDADIAQEAIFRGGGQIVPTARRVCYSSFLMASPK
LMEPVYYVEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFETD
LRTATQGQAFCLQIFDHWSAIPGTIWLTKILDQGDPMDTSIKLRPLEPASGQALARDLVL
KTRRRKGLGDQIAVSKYLDDEFVVSCRFVTLSHYPDPGAALGPGMIFVHKNDADTVAISV
AVLATAGTLVSCESLKELPTFTPTEIKAPFLEQFTEDWADRWTASEATKKNNAGSETFSY
VGKWKVEEATKSIIKGDKGLVAKSPASHHAISAPFKKPIDFKQKPLVVQYEVNYQKGGSC
GGGYIKLLEDGFQSSGQDFDDKTPWVVMFGPDLTCPGTKVHFIVRHKSPMTEEIEEKHYT
GHPRFLVEKYTNLHTLVLHPNNTFNIYLNGELDKTGNLLEDMQPPVNPPTEIDDPSDSKP
DDWVEDDRIIDIHATKPDDWDEDAPRRIPDDEAEKPEGWLDDELPHIPDPDATKPDEWDD
EEDGDWVAPTMPNPKCDNAPGCGPWERPMKNNPNYKGRWSAPLIDNPDYKGPWAPRKIPN
PNYFEDPTPIKNLPKIGGVGIELWTMTEDILFDNLYIGHSLEHAKKLAAETFDIKKPLER
LAASVIEKLEGKDDEDDDDEVSFKDDPVGFIRNRVLSFVENVKEDPIEAFKTQPETGVAL
LVTLFTIFGMFSGFLGFGGASAKPVITQVCLFDSILYLSTKSSLFQTAKKADTSEKKSET
TSDDKKDDLKKRK
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttggaagattacgatgagtttggaaactacattggagctgacttggattcc
gacgcggaagacgaagagttgaatcagggccaatatgctccccagccttccggagctcct
gcaccgctggagggattcgatgatgaacctatgcaggagccagaaaacgaaatggctctt
atggaggtcgacgatgagccaagacacaaggctgtcgtcctccatgaagacaaacaatac
tatccgactgcaggagagttgtatggagcagacgtggagactcttgtgcaggaagaagac
gcccaaccactttctgaaccaattgttgcacccatcaaaatacgcagatggactgtggaa
gagaaggatatgccagaaacgcgctttgacaaagggttcttgttgaatatgacagctttc
cctgagatgattcgtaatgtcgccgttgtaggacatctgcatcatggaaagaccgcgctt
atggatatgttggtctttgagacgcataagctaatatgggatgcggataaaccgacccgg
tataccgacactcatgttctctcgcgagaacgtgaaatctccataaaatcatcccccatg
tcgctcgttctccagaccacatctggaaaatcccatctcctccacctaatcgacacgcct
ggacatgtcaactttcttgacgaagttgccgcagctatacgacttgcggatggtatttta
cttgtcgttgacgtcgtggaaggactcatggtcggtgcggagtatattatccggcatgct
ttgcaagaaaatctcaaaattacacttgtcgtgaacaaaattgacagactcatccttgag
ctgcgaatcaaacctgctgacgcctattataagataaaacacactatcgaagagattaat
actttcatcagcaacattgacccagatccagagcttcgtctgagcccagagaacggaaat
gttgcatttgcgagtacggatatgaattactgcttcactttgcgctccttcgcgaagttg
tatgcagacacatatggcaaactagacgtcaatgccttcgccgcccgcctttggggtgat
atctacttcgatgaagagtcgcgacgctttacgcgtaaacaatctgatcccgaacaaaac
cgtacctttatccattttattctaaatcctttatacaaaatctacagcaacgtgctaagc
gaagataccgatgcattgcgagagactttggcctctcttggaatcaccctgaagcctgtg
atatataaaatggacgttcggccgttgctcaaggtcgtcttggatcaattttttgggagt
tcaacgggtttagtcgacgtgattgtagaacatattccttcacccgttgaaaatgcggcg
aacaaggttgagggtatttatactggtccccaaacttccgaactcgcggtctccatgaag
tcatgcgatcccgagggtcccgtcatggtgcatatcaccaaattgtatcacacaaccgac
gcacaatcttttagggcttttggtcgtgtgataagtgggaccttgagaaaaggtgcggaa
attaaggtattgggagaggagtattcgccagaagatgaggaagacatgatgaaagccacg
gttgaggatctatggataagtgaagcgcggtacttcattcctgcggaagaggttgctgca
ggtaatctcatactcattggtggagttgatgcctcaatctccaagactgcaaccattgct
tcaacgtccattgatgatgatttatacatattccgaccgatgaaacacatgacggagtcg
gtactcaaagttgctattgagcccatagcaccgtcggagctgccaaagatgcttgctggc
ctgagaagcatcaacaagtcctatcctttgatttcaacaaaggtggaagaaagtggagaa
catgtcatgattgggacgggagaattgtatctggactgtgtgatgcatgatctgcgaagg
ttattttcggagattgagattaaagtgtcggatccagtgaccaagttttgtgagacggta
ttggagacgagcgcattgaaatgctatgccgacaccccgaataaaaagaacaaaatcact
atgatcgctgagcccctcgaacgtggtattgcggaagatattgaacgtggacgagtcacg
atgaagatgacagcgaaggataggggcaaattttttgaggaaaagtatcaatgggatctt
cttgcctctcgatcaatatgggcatttggtccttacgacaatgggcccaatgttctccta
gacgacacacttccttcacaggtggataagaaactgcttggaaccataaaagaacatatc
aagcaaggctttcagtggggagcacgggagggacctctatgtgacgaacccatgagaaac
gtgaagttcaggctactcgacgctgatatagctcaagaggcaattttccgaggaggagga
caaatagtgcccacggctcggcgagtctgctattcatcattccttatggcatcgccaaaa
ttgatggagcctgtgtactacgttgaagtgcaagcacccgcggattgtatctccgctgtg
tatactgtccttgcaagacgtagagggcacgtaacacaggatattccgaaggccggttcg
ccgctatatactgtgaaggccctgattcctgtcattgatgcgaacggatttgagacggat
cttaggacggcgactcaagggcaagcgttttgcctgcaaatatttgaccactggtccgct
atcccaggcacaatttggctgacaaaaatccttgatcaaggtgatcccatggacaccagc
atcaaactacgcccgctagaaccagcatccggacaagcattagcgagagacctggtgctc
aaaacacggaggcgaaagggtctcggagaccaaattgccgtttctaaatacttggatgat
gagtttgtggtaagctgtcgttttgtaaccctttcacattacccggacccaggggcggcc
ctgggaccgggaatgatatttgttcataagaatgatgctgacaccgtagcgatctctgtc
gcagtccttgccaccgctggcaccttggtcagctgtgaatctctcaaggaattgcccact
ttcacgcccactgaaatcaaggcacctttccttgaacagttcactgaggactgggcagac
cgctggacagcctcagaagcaactaagaagaacaatgctggttcagaaacattctcttac
gtcggcaagtggaaagtggaggaagccaccaaatccatcatcaaaggtgacaagggcctc
gttgccaaatccccggcttcccaccatgcgatttccgctcctttcaagaaacccattgac
ttcaagcagaaacctctagtagtgcagtacgaagtcaattaccagaaaggtggtagctgc
ggtggtggatacatcaagttgcttgaagacggcttccaaagcagtggtcaggacttcgat
gataaaaccccttgggttgtcatgtttggtcccgatttgacatgtcctggcaccaaggtg
cactttattgtccgtcacaagagtccaatgacagaggaaattgaggagaagcactatacg
ggacatcctcgtttcttggttgagaagtacaccaacctccacactcttgttcttcacccc
aacaataccttcaacatctaccttaacggcgagctagataagactggaaaccttctcgaa
gacatgcaaccccccgtcaacccgcccacggaaattgatgatccctctgatagtaaaccc
gatgactgggttgaggatgaccggattattgacattcatgctaccaaacccgacgattgg
gacgaagatgctcctcgtcggatcccagacgatgaagccgagaagcccgagggttggctt
gatgacgagctcccacatatccctgaccccgatgccaccaaacccgacgaatgggacgat
gaagaagatggtgactgggtcgctcctacaatgcctaatcccaagtgtgacaatgctcct
ggttgtggtccatgggaacgccccatgaagaacaatcccaactacaagggaagatggagc
gcccccttgattgacaaccctgattacaagggcccttgggctcctcgtaagattcccaac
cccaactacttcgaggaccccactccaattaagaatctccccaagattggtggcgttggt
attgagctctggactatgactgaggacatcctctttgacaacttgtacatcggtcactcc
ttggagcatgccaagaagctagctgcagagacctttgacatcaagaagccccttgagagg
ctggccgctagcgtgatcgagaaactcgagggtaaagatgacgaagatgatgatgatgag
gtttccttcaaggacgatccagtcggtttcatccgcaacagggttctcagcttcgtcgaa
aatgttaaggaggatcccattgaagccttcaagacccaacctgaaaccggtgtcgctctc
cttgttactctcttcaccatcttcggtatgtttagcggattccttggctttggtggtgct
tcagcaaagcccgtcattactcaggtatgtctttttgatagcatattgtatctatcaact
aagtcttctctcttccagaccgctaagaaggctgacacatcggagaaaaagtcagagacc
acaagtgatgataaaaaagacgacctgaagaagcgcaagtga
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integrated database retrieval system
