Argiope bruennichi (wasp spider): 129976215
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Entry
129976215 CDS
T09870
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
abru
Argiope bruennichi (wasp spider)
Pathway
abru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
abru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129976215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abru03400
]
129976215
Enzymes [BR:
abru01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129976215
DNA repair and recombination proteins [BR:
abru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129976215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
LIG3_BRCT
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
129976215
NCBI-ProteinID:
XP_055945641
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All DBs
Position
7:complement(83433818..83462887)
Genome browser
AA seq
920 aa
AA seq
DB search
MSTVAEHVPFLHLCRLCQKISDKKGKDKKVKPLVEFIHYWQDFHKKLHTSNPDTTDSFFP
AMRLLLPQCERQRAAYGIKEFTLAKLLIEIFCLDKNSVDAQKLLNYRSPKSANAEAGDFA
SVAYFVLKNRSPEKGTLTIYDINYYLDSIAANHADKNKDELKHDLLHLLRNTTALEQKWL
IRMILKDMKLGISENTILNAFHTDARDLYNVTNSLEKVCCSLKDRSVRLHEIEISLFSPF
RPMLAEMALPTQVEGLMKGKPFFIETKYDGERLQLHKDGNSYMYFSRGGFDCTETYGSTP
SQGNLTPFIHKSFKPGINKCILDGEIVIYSNKLNCIVSKGENADVQALEPDGDYEPCFCV
FDILMLNDKVLSSLPLTERISYIKNTFTAIENKIRYTEQITASTNDEVTEELNKAIDSRL
EGIVVKNPDSIYKPNMRKGCGWLKVKPEYIENLMDELDLLIIGGYYGEGRRSTAISHFLL
AVASPDQTDGMPNKFYSFSKVGSGYSFKELYELSGKFGDHWQPYNPKKSPSYLVIGGGRK
EQPDVWIEPSKSVIVQVKASEIVRSKGFATNCTLRFPRVEKIRYDKPWHDCMTTIELDDL
RNLAQGRLATKRSVASEEEPSPKKQKIPKEKAATVAPHFRPTDTSSVQKVSELFKDKEIC
VIFASLERKQAMEKLIVQHGGKCVQNPGNNTFCVVCDKTTVKVKNIIKTDMYDVVKCEWI
DKCIQNQRLLSWIPDDLIHATEKTRDNLGELFDKYGDSFTEDVTEDSLMKIFSNIPKEEW
MSVEVSSRQIAEMEKSLFSEQSPYGLFRECWIFIKSKNDDVIPFEDLNEDCKILYFQLKL
HGANMCKSTDDRTTHIIIPSCDGMSEKVCESMAQLKKRNIHILTEQWAQDSIKENKLLNE
EDYEIKKESVDSSDESLFSF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagttgcagaacacgtcccttttttacacctgtgtaggttatgtcaaaaaatt
tcggataaaaaaggaaaagataaaaaagttaaacctttggtagaatttatacattattgg
caagactttcataaaaaacttcatacatctaatcctgatacaacagattccttttttcct
gccatgcgtcttttacttccgcaatgtgaaagacaaagagcggcctacggaataaaagag
tttactttagccaagctgttgattgaaatattttgtctggataaaaacagtgttgatgcc
caaaagcttctgaattatcgatctccaaaatctgcaaatgcagaagcaggggattttgct
agtgtggcatactttgtactgaaaaacagaagtccagagaaaggaaccttgacaatttat
gatataaattactatcttgatagcattgcagctaatcatgcagataaaaataaagatgag
ttaaagcatgatttattgcatttgttacggaacacaacagctttggaacagaagtggtta
attagaatgattttaaaagatatgaagttaggaataagtgaaaatacaattctaaatgca
ttccatactgatgcaagagatttatacaatgttacaaatagtttggagaaggtttgctgc
agcttgaaagaccgatctgttagacttcatgaaattgaaattagtcttttctcacctttc
cgtcctatgttagctgaaatggccttaccaactcaagttgaaggactaatgaaaggcaaa
ccattttttattgaaacaaaatatgatggagaaagactgcagcttcacaaggatgggaac
tcctatatgtatttttctagaggaggatttgattgcacggaaacatatgggagcactcct
tctcaaggcaatttaacaccatttattcacaaaagtttcaagccaggcattaacaaatgc
atcttagatggagaaattgtgatatacagcaataaactgaattgcattgtttcaaaagga
gaaaatgctgatgttcaagctctggaaccagatggagattatgaaccctgcttttgtgtt
tttgatatattgatgcttaacgataaagtactgagcagtcttcctttgactgagagaatt
agttacatcaagaatacctttactgccattgaaaataaaatccgatacactgaacagata
actgcctcaactaatgatgaagttactgaagaattaaacaaggcaatagacagtagatta
gaaggtattgttgtgaaaaatcctgattccatttataaaccaaatatgcgaaaaggatgt
ggatggctgaaagtcaaaccagaatatattgaaaatttgatggatgaattagacttgctt
atcattggtggatactatggtgaaggacggcgatccactgctatatctcattttttactt
gcggtggcttcaccagaccagacagatggcatgccaaataaattttattccttcagtaaa
gtcggttctgggtattcatttaaagaattgtatgaactttctgggaagtttggagatcat
tggcagccctacaatcccaagaaatccccaagttatttagtaattggtggaggaagaaaa
gagcaacctgatgtgtggattgaaccttcaaaatctgttatagtgcaagtaaaagcatct
gaaatcgttagaagcaaaggttttgctacaaactgcactcttcgattccccagagttgaa
aaaattcgttatgacaagccttggcatgattgtatgaccacaatagagctggacgatctt
agaaatttagcccaaggtagattggcaacaaaaaggagtgttgctagtgaagaggaacct
tctccaaaaaagcaaaagattccgaaagagaaggctgctactgtcgcacctcattttcgt
cctactgatacaagctctgttcaaaaggtttctgaactttttaaagataaagaaatatgt
gttatttttgcttcgcttgaaagaaaacaagccatggaaaaacttattgttcagcatggt
ggaaaatgtgtgcaaaatccaggtaacaatactttctgtgttgtctgtgataaaactaca
gttaaagtgaaaaatataataaaaactgacatgtatgatgttgtgaagtgtgaatggatt
gacaagtgcatacaaaaccaaaggttattgtcatggattcctgatgatttgatacatgca
acagaaaaaactcgtgataatcttggagaactttttgataaatatggagatagctttact
gaagatgttaccgaagattctttgatgaaaatattcagtaatattccaaaagaggaatgg
atgagtgtagaagtatctagtcgacaaattgctgaaatggaaaaatctttattttctgaa
caatccccatatggtctgtttagggaatgctggatattcataaaatcaaaaaatgatgat
gttattccatttgaagacttgaatgaggattgcaagatattatattttcaactaaaatta
catggagctaatatgtgtaaaagcactgatgatagaactactcatatcattataccatct
tgtgatggcatgtctgaaaaggtttgtgaatccatggcacagttgaaaaaaagaaatatt
cacatactaactgagcaatgggcacaagacagcataaaagaaaacaagcttttgaatgaa
gaggactatgaaataaaaaaggaatcagtggatagtagtgatgaatcattgttttctttt
tag
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