Agaricus bisporus var. bisporus H97: AGABI2DRAFT191849
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Entry
AGABI2DRAFT191849 CDS
T03140
Symbol
AGABI2DRAFT_191849
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
abv
Agaricus bisporus var. bisporus H97
Pathway
abv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGABI2DRAFT191849 (AGABI2DRAFT_191849)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abv03019
]
AGABI2DRAFT191849 (AGABI2DRAFT_191849)
Messenger RNA biogenesis [BR:
abv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AGABI2DRAFT191849 (AGABI2DRAFT_191849)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_15
AAA_23
RsgA_GTPase
SMC_N
SRP54
Zeta_toxin
AAA_28
MMR_HSR1
PduV-EutP
Arf
Motif
Other DBs
NCBI-GeneID:
18081935
NCBI-ProteinID:
XP_006460079
JGI:
Agabi_varbisH97_2_191849
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MDNVVAVAALTYAHAPDAPPSLSHINLDLPPGSRTLLVGANGAGKSTLLQILSGKRLVTA
PGSSILVKGHDVFRNTPPGISFLGTEWAMNPVVRGDIVVSTFLDSVGGYRHKERRDRLLD
ILDIDLDWHMHQISDGERRRVQLCFGLMIEWDVLLLDEVTVDLDVLVRDELLTFLKNDSE
TRGSTILYATHIYDGLDNFPTHVAHMRLGSFVTPPTSWPITKDSALSAQFQAGTPLFEVA
LQWLREDKAYRKELENQGLRKTRGRRIEAVPSDSETFYRKYDYSH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggataatgtcgttgccgtcgccgccctcacctacgcccacgcccccgacgcccctccc
tctctctcccatatcaacctcgaccttccaccaggctcgcgcaccctcctcgtcggtgca
aacggagccggcaagtccactctcttgcagatcctctctggaaaacgtctcgtcacagct
cctggctccagcatccttgtcaagggccatgatgtctttcgcaacacccctcctggcatc
tctttcctcggcacagaatgggctatgaaccccgtcgtcagaggcgatatcgtggtatct
acattcttagattctgtcggcggctacaggcataaagagcgccgtgaccgcctcttggat
attctcgacattgatctcgactggcacatgcatcagatttccgatggcgagcggcgccga
gttcaactctgtttcggtctcatgattgaatgggatgtccttctccttgatgaggttacc
gtcgacctagatgtccttgtgcgcgacgaattactcacttttctcaagaatgacagcgaa
acgcgtggctccaccattctttatgctacacatatttatgatggtttagataactttccg
acccatgttgcacatatgcgccttggttctttcgtcactccgcctacttcttggcccata
accaaagattccgccctatcggctcaattccaggcgggcactccccttttcgaggtagct
ctacagtggctgagggaagacaaggcatatcgcaaggaactggagaatcagggcctaaga
aagaccagagggcggagaattgaggcggttccatccgattctgaaacattctaccgcaaa
tacgactatagtcattag
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integrated database retrieval system
