Acinetobacter baumannii 1656-2: ABK1_0797
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Entry
ABK1_0797 CDS
T01819
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
abx
Acinetobacter baumannii 1656-2
Pathway
abx03030
DNA replication
abx03410
Base excision repair
abx03420
Nucleotide excision repair
abx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABK1_0797
03410 Base excision repair
ABK1_0797
03420 Nucleotide excision repair
ABK1_0797
03430 Mismatch repair
ABK1_0797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abx03032
]
ABK1_0797
03400 DNA repair and recombination proteins [BR:
abx03400
]
ABK1_0797
Enzymes [BR:
abx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABK1_0797
DNA replication proteins [BR:
abx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABK1_0797
DNA repair and recombination proteins [BR:
abx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABK1_0797
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABK1_0797
MMR (mismatch excision repair)
DNA ligase
ABK1_0797
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABK1_0797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADX02431
LinkDB
All DBs
Position
882802..884811
Genome browser
AA seq
669 aa
AA seq
DB search
MRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVGGQAL
SKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGLAISLWYENG
VLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMPKSGFEKLNA
DQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLTTMHDSLQWL
TELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQQQLGFLSRE
PRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVTLHNIGEIHR
LDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVMPEGEALARC
SGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHLHEHRETLLG
IEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTLEALKAANVE
ALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLNGESWVLTGT
LEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPVMNETDFLSL
MAGYGQTLS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagcttattcaactgattgcaaagcataaccatgcctactatgtcatggatcag
ccgacaatctcggacagtgaatatgatcatttatttcatcagttaaaagctttagaagaa
caatatccggaacttgtacaagccgactcaccaacaacaaaagtaggtggtcaagcgctt
tcaaaatttgagagtgtgacgcatgtggtccccatgctttcacttggtaatgtatttaac
caagaagacttatttgcatttgcacgccgtgtagaagagcgacttccgaaccagaaagta
caatatgaagttgagttaaaactcgacggccttgcgatttcactatggtatgaaaatggt
gtacttgttcgcggtgtaacccgtggggatggcgaaacgggggaagacattactcaaaac
gttaaaactattcgtaacttacctaaagttctgcattcagaaaaatatgaaatacctcgt
ctacttgaagtacgtggtgaagtattgatgccaaagtctggttttgaaaaactcaatgct
gaccaagaagcaaagggagaaaaaaccttcgctaaccctcgaaatgcagccgcaggaagt
ttaagacaacttgatccaaatattgctgctgctcgacctttggcattttatgcgtatggg
attgcacagtgtgaaccgaatcatggcctgacaaccatgcatgatagcttacaatggtta
acggaacttgggttccaaattgctgagcgtcagtacttgtgtaattcaattcaagaagta
cagcagcgctatgagcaaattcagcaagaacgtccaaacttgcaagttgaaattgatggc
atggtggtgaaggttgatgacctaaaacaacaacagcagcttggtttcttaagtcgtgaa
ccacgctgggcaactgcttataaattcccggcacaagctgcattaactacagttgagcag
attgactggcaagtagggcgtacagggactttgacccctgtagcacgcttaaaccctgtt
tttgtgggtggtgtgactgtttctaacgtaacgttgcataatattggggaaattcatcgt
ctggatgtacgcattggcgatacggtaagtgtatatcgtacgggtgacgtgattcctaaa
gtagaaaaagtttggccggagttccgtcctgctgaagcagaagttgttcatttaccagag
tcctgcccagtatgtgcttcgcctgtagtgatgcctgaaggtgaggctctcgcacgttgt
tcaggcggtttatattgtgccgcacagcgtattgaagccattcgtcactttgtatcgcgt
aaagcgatggatatcgagggcttgggagatcgttgggtagaatctttattacgtctcgat
ttacttaaagatgttgctgatatttaccatttgcatgagcacagagaaactctcttgggc
atcgaaaaaatgggagaaaagtcagtacagaacctaatagatgcgattgaagcaagtaag
aaaacaactctagcacgttttatttatgcattaggtattcgtggagtaggtgaaacaacg
gctagaatgttagcaaatacatttcagacgctagaggcacttaaagctgcgaatgtagaa
gctttaaagaaaaccccagatgtaggggatattacagcagagtggattgctgactttttc
ttggcaccgcataacattgaagtactcgatcgtttaattgccgcaggaattcattgggat
gcaccaacagcaccaacgcgtcaacctttaaatggtgaaagctgggtacttacaggtaca
ttagaacaaatgacccgtgatcaggccactcaaatgctacaagcattaggtgcacgagta
agtgggagtgtttctagcaaaacaaaatgtgtagttgctggtgagaaggcgggttcaaaa
ttagaaaaagctgcgaagttaggtattcccgtcatgaatgaaacagatttcttatcactc
atggcaggctatgggcaaactttgagctaa
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