Acinetobacter baumannii AYE: ABAYE3010
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Entry
ABAYE3010 CDS
T00667
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aby
Acinetobacter baumannii AYE
Pathway
aby03030
DNA replication
aby03410
Base excision repair
aby03420
Nucleotide excision repair
aby03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABAYE3010 (ligA)
03410 Base excision repair
ABAYE3010 (ligA)
03420 Nucleotide excision repair
ABAYE3010 (ligA)
03430 Mismatch repair
ABAYE3010 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aby03032
]
ABAYE3010 (ligA)
03400 DNA repair and recombination proteins [BR:
aby03400
]
ABAYE3010 (ligA)
Enzymes [BR:
aby01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ABAYE3010 (ligA)
DNA replication proteins [BR:
aby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABAYE3010 (ligA)
DNA repair and recombination proteins [BR:
aby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ABAYE3010 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABAYE3010 (ligA)
MMR (mismatch excision repair)
DNA ligase
ABAYE3010 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABAYE3010 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAM87830
UniProt:
B0V8E4
LinkDB
All DBs
Position
complement(3035074..3037149)
Genome browser
AA seq
691 aa
AA seq
DB search
MEKFPPFFMVNKIMAITSVIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKAL
EEQYPELVQADSPTTKVGGQALSKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQ
KVQYEVELKLDGLAISLWYENGVLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEI
PRLLEVRGEVLMPKSGFEKLNADQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYA
YGIAQCEPNHGLTTMHDSLQWLTELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEI
DGMVVKVDDLKQQQQLGFLSREPRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLN
PVFVGGVTVSNVTLHNIGEIHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHL
PESCPVCASPVVMPEGEALARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLR
LDLLKDVADIYHLHEHRETLLGIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGE
TTARMLANTFQTLEALKAANVEALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIH
WDAPTAPTRQPLNGESWVLTGTLEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAG
SKLEKAAKLGIPVMNETDFLSLMAGYGQTLS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaatttccacccttttttatggtgaataaaataatggcaataacttccgtgatc
gaacagatgcgtcagcttattcaactgattgcaaagcataaccatgcctactatgtcatg
gatcagccgacaatctcggacagtgaatacgatcatttatttcatcagttaaaagcttta
gaagaacaatatccggaacttgtacaagccgactcaccaacaacgaaagtaggtggtcag
gcgctttcaaaatttgagagtgtgacgcatgtggtgccaatgctttcacttggtaatgta
tttaaccaagaagacttatttgcatttgcacgccgtgtagaagagcgacttccgaaccag
aaagtacaatatgaagttgagttaaaactcgatggccttgcgatttcactatggtatgaa
aatggtgtactcgttcgcggtgtaacccgtggggatggcgaaacgggtgaagatattact
caaaatgttaaaaccattcgtaacttacctaaagttctgcattcagaaaaatatgaaata
cctcgtctacttgaagtacgtggcgaagtattgatgccaaagtctggttttgaaaaactc
aatgctgatcaagaagcaaagggagaaaaaaccttcgctaaccctcgaaatgcagccgca
ggaagtttaagacaacttgatccaaatattgctgctgctcgacctttggcattttatgcg
tatgggattgcacagtgtgaaccgaatcatggcctgacaaccatgcatgatagcttgcaa
tggttaacggaacttgggttccaaattgctgagcgtcagtacttgtgtaattcaattcaa
gaagtacagcagcgctatgagcaaattcagcaagaacgtccaaacttgcaagttgaaatt
gatggcatggtggtgaaggttgatgacctaaaacagcaacagcagcttggtttcttaagt
cgtgaaccacgctgggcaactgcttataaattcccggcacaagctgcattaactacagtt
gagcagattgactggcaagtagggcgtaccgggactttgacccctgtagcacgcttaaac
cctgtttttgtgggtggtgtgactgtttctaacgtaacgttgcataatattggggaaatt
catcgtctggatgtacgcattggcgatacggtaagtgtatatcgtacgggtgacgtgatc
cctaaagtagaaaaagtttggccggagttccgtcctgctgaagcagaagttgttcattta
ccagagtcctgcccagtatgtgcttcgcctgtagtgatgcccgaaggtgaggctctcgca
cgttgttcaggcggtttatattgtgccgcacagcgtattgaagccattcgtcactttgta
tcgcgtaaagcgatggatatcgagggcttgggagatcgttgggtagaatctttattacgt
ctcgatttactcaaagatgttgctgatatttaccatttgcatgagcacagagaaactctc
ttgggcatcgaaaaaatgggagaaaagtcagtacagaacctaatagatgcgattgaagca
agtaagaaaacaactctagcacgttttatttatgcattaggtattcgtggagtaggtgaa
acaacggctagaatgttagcaaatacatttcagacgctagaggcacttaaagctgcgaat
gtagaagctttaaagaaaaccccagatgtaggggatattacagcagagtggattgcagac
tttttcttggcaccgcataacattgaagtactcgatcgtttaattgctgcaggaattcat
tgggatgcaccaacagcaccaacgcgtcaacctttaaatggtgaaagctgggtacttaca
ggtacattagagcaaatgacccgtgatcaggccactcaaatgctacaagcattaggtgca
cgagtaagtgggagtgtttctagcaaaacgaaatgtgtagttgctggtgagaaggcgggt
tcaaaattagaaaaagctgcaaagttaggtattcctgtcatgaatgaaacagatttctta
tcactcatggcaggctatgggcaaactttgagctaa
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integrated database retrieval system
