Aristolochia californica: 137951745
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Entry
137951745 CDS
T10486
Name
(GenBank) LOW QUALITY PROTEIN: ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137951745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137951745
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137951745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
ORC-CDC6-like
AAA_29
AAA_15
AAA_23
AAA_5
AAA
nSTAND3
NACHT
Zeta_toxin
AAA_28
Gtr1_RagA
DUF815
AAA_8
Motif
Other DBs
NCBI-GeneID:
137951745
NCBI-ProteinID:
XP_068654733
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MGKGVDQTKEEHEVPNRDASIQVCGLQFSYEGQPPLFTEFNLSFSPGSRCLLVGANGSGK
TSLLKIMAGKHMVGGRDVVRVLNSSAFHDTSLVCSGNLAYLGGSWSKSVGSTGEIPLQGD
FSAEHMIFGVEGIDPVRXEKLIELLDINLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLD
EVTVDLDVVARLDLLDFFKEECQQRGATIVYATHIFDGLETWATDVAYIQDGELKRAEKL
SELSELKIAPNLLAVVESWLRSETKSTSKRVLNHSTQLTLVSPFGTSPFKPSRHMAYYR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggagtcgatcagacgaaggaagaacacgaggttccgaacagagacgccagc
attcaagtatgtggtctacagttctcttacgagggccaacccccgctcttcaccgagttc
aatctcagcttctctccgggatctcgatgccttcttgttggagctaatggatccgggaag
actagtttgttgaagattatggcaggaaagcacatggtgggtggtagagatgttgttcga
gtgctgaacagttcagcttttcatgacacttctcttgtttgtagtggcaaccttgcctat
ctaggaggttcctggagcaaaagtgttggttccactggcgaaatcccactccaaggagat
ttctctgccgaacacatgatttttggagtggaagggatagatccagttaggnnagagaag
ctgattgaactccttgatatcaaccttcagtggcggatgcataaagtttctgacggccag
cgacgcagggtccaaatttgcatgggtcttcttcatcctttccaggtgctgctgcttgac
gaggtcacagttgatctggatgttgtagcaagactggatctacttgatttctttaaggaa
gaatgtcagcagagaggagccacaattgtttatgctactcatatctttgatggcttggag
acttgggcaacagatgttgcatacatccaagatggagaattgaagagagctgaaaaatta
tcagagctcagcgaattgaaaattgctcctaacctgctcgcagttgttgaatcatggctt
cgatcagaaaccaagtctacctccaagagagttttgaatcactcaacccagctcaccctt
gtctctccttttggcacttctccttttaagccatcaagacacatggcttactatcgttaa
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