Aristolochia californica: 137962002
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Entry
137962002 CDS
T10486
Name
(GenBank) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
acak Aristolochia californica
Pathway
acak03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137962002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137962002
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137962002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Big_2
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_15th
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
137962002
NCBI-ProteinID:
XP_068664788
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MGFRVVFSRLLLLLVIFPSLSHSASGPHIADLTVLLPPRMTNPVEYRLQGSDGCFSWSWD
HHDVLFVQPEYNGTDHCSTSARLISVAPYSGRKETAVYAADVRTGTVIRCEVFIGKISKI
RIFHHSVKLDLDGLATLQVLAFDEEDNVFSSLVGLKFKWELTPKLSEVNGPLHHLVHVPL
RDTPLSDCGGFCGDLNTQIKLEDTGIGSDLYVVRGTEIGQEIVSVYLFEPQFEHVGDQII
LTVAEAMSLDPPSPIFVIIGALLQYSLRVIRQNTPQVIALPSPYHQWYATNSSVAEVDLT
RGLADALSLGITSVIVEDTRVAGHVQTSMLHVVLPEKLHLYLVPVTNSAEPMDGIIATSS
TDMWYIVAGLQYVVHMKAFSAGPDAYEIYITKNNDVRLLFNHPALWDTAMVPEEACVKHG
WRNSRLIKPTSEGLGSLTAKLSYKKGNTEKLEVLKVVQQIIVCNPVEISKGNEKSFPWII
RLPWAPKIYQEVGLTARGGCAKTFRDYNWYSSDTATVSVSSAGVVRANRPGKATVKVVSV
FDSMNYDEVVIEVSVPASMIMLQEFPVEAVVGSHLRAAVTMKTAHGHYFFRCDAFSSLIR
WQVLAGSESFRIVNTTGEPSEYDALTKVVHLTSFMPPCAWTHLYALNTGRATLHASLTKE
LQTSDPSFGGPIILKATCLIAAYPPLVAKQAGHGNEFGGYWIDLEMAQTLIDKLYLVPGT
ELDIVLLGGPEPWDHGVEFFESVDAFTEDDKPLKDGPLINQASTGNLRLFRISCHTIRNY
KLVFSRGNLVGDGHPQPAVANLEVFLICSIPSLITLIVNEPVNKPDFIRSAIQADRGPGK
IRVSPISVANSCTIRVAAVGVHDSGSAFANSSSLCLQWELSGCEQLAYWKESDHRERSEC
NWERFLVLQNATGLCVVQATVRGLSGATPIHLLDEVSFLLESSKKDLTDGVRLQLVSSLR
IIPQSILLFFDPHAKAKLSIIGGTCFLEAMVNDSNVVEIIQPPASTHCSSLRLSPKGLGT
ALITVHDVGLTPAIAASSMVQVADVDWFKIVSQEEISLMEGTIQQFDVLAGIRDGSIFDP
SQYVNMHIHVHIEDGVLDLVDKDGFSRPVCEEIQGPTFFIRAAQLGVTTLHVSARRQSGH
ELLSQLVKVEVYAPLQLLPEDIFLSPGASYVLTVRGGPMIGAVVEYVSMDDEIAKVHRSS
GRLSAVSEGNTSIHATAYGHEGAMICQAYGRVEVGIPSKMVLNLQSEKLGVGHDMKLFIS
SAEGNLFSFYELCKNYEWKIDNDQVLSFQTLGPSNYNDLGFMNVVFGRSAGKSHIHVSFS
CDFVSSGSFRHSVSYNASGSLLVVSEPPLALGVPITWVLPPFYTSSDLLPAPIESYNEWD
ARNRKGAISYSLLRTCGGKTDFRQQDSISIVGGRIKTKESDNLACIQAKDLTTGNTAIAS
CVRVAEVSQVQVTTKDFPFHVAEVAPGAEVELLVSLRDALGYSFHEAYGVVPLHIDTNYP
DIVSIELPKAANRTQPGVGKIFLQANHHGRSLIRISMNDDPQKADYILISVGAHLHPQNP
VLNVGHHLNFNVTGRGKSDVGGRWFSANESVVSVDMLSGEAHAVGEGSSEVFLEGSTLNL
RTKVMVLRVASVLVDAPGETLTNVPFPLKGYNFSVRFSDSYSDKFGAYGSTGEFMYDCRV
DPSFVGYAKPWRDLDTGNKYCLFFPYSPEHLVHSIPKLKAGKTELTSHFGEGVLDISVIA
TLREDQEVMGSAHALFIGGFSLLGKSKLNLKANSNKCLITVVGNTDVVFYWTARDRILVN
LLHKDESGIGGHAEYEVKVLYGQSVKDRLVIVLPATGQNAEIDINYEAEDGDVQKMNRGI
IWTAMLWILFSFLVAVIFMRYFWGTPYTSRRSVPATPTVSAAPVTPERHPSSGDQTSPRT
PQPYIEYIRRTIDETPYYRRTGRRFDPQNTY
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcagagtagttttctccagattattactgctgctggtgatttttccctcactt
tctcactcagcttccggtcctcacattgccgatctaacagtccttttgcctcctcgtatg
actaatcctgtcgagtatcggcttcaaggaagtgatggctgcttctcttggtcttgggat
caccatgatgttctttttgtccaacccgaatacaatggtactgatcattgttcgacgagt
gctcggctgatatcagttgccccttatagtggcagaaaggaaactgctgtttatgctgct
gatgttcggactggaactgttattcgttgtgaagtttttattggcaaaatctccaagatc
cgtatttttcatcactcagttaagcttgaccttgatgggcttgccacacttcaggttctt
gccttcgatgaagaagacaatgtattttcatctttggttgggttaaaatttaagtgggag
cttacacccaagctttctgaagtaaatgggcctcttcatcatcttgttcatgttcctttg
cgggacactccactaagtgactgtggtggattttgtggtgacttgaacacccagataaaa
ctggaggatactggcattgggtcagacttatatgtagtacggggaactgaaattgggcaa
gaaattgtctccgtctatttgtttgaaccacaatttgagcatgtaggagaccaaattatt
ttaactgttgcagaagcaatgtcgttggatccaccttcaccaatttttgtcattattggt
gctttgctccagtacagtcttagagtgattcgccaaaatacccctcaagtgattgcatta
ccctctccttatcatcagtggtatgcaaccaactcctctgttgctgaagtggatctcact
aggggtcttgctgatgcattgagcttagggattacaagtgtcatcgttgaagatactaga
gttgctggccatgtgcagacatcaatgttgcatgttgttctcccagaaaaactacatttg
tacttagtgcctgttactaactctgctgagcccatggacggaataattgctacttcatct
acagatatgtggtatattgttgctgggctacaatatgttgttcacatgaaagccttttca
gctggacctgatgcatatgaaatatatattacaaagaacaatgatgttaggctgctgttc
aaccatcctgcactgtgggatactgccatggtgccagaagaggcctgtgtgaagcatggt
tggcggaattcaagattaatcaaaccgacttctgagggtttaggaagcttgactgctaaa
ctttcttacaaaaaggggaatacagagaagctagaggttctcaaggttgttcagcaaatt
atagtctgcaatccagtcgaaattagcaagggaaatgaaaaaagttttccatggatcatt
cgcctcccttgggcccctaaaatttatcaggaagttgggctaacagcaagaggaggttgt
gccaaaacgtttagagattacaactggtattcttcagatactgccactgtctcagtttct
tctgctggagttgttcgtgcaaacaggcctggaaaagcaaccgttaaagtagtctccgta
tttgactcaatgaattatgacgaggtggttattgaagtttctgttcccgcttcgatgatt
atgctgcaagagtttcctgtggaggctgttgtagggagccaccttcgggcagcagtgact
atgaaaacagctcacggtcactatttttttaggtgtgatgcttttagttcattgatacga
tggcaagtgcttgctggaagcgagtcctttagaattgtgaacactactggagaaccatct
gagtatgatgccctaacaaaagttgtccacctcacatcctttatgcctccatgtgcatgg
acccacctgtacgctttaaatactggtcgggccacactgcatgcatcccttaccaaagag
ctgcagacttctgatccgtcctttggtgggcccatcattcttaaagcaacttgtcttata
gccgcataccctccacttgttgcaaagcaggcagggcatggaaatgaatttggaggttac
tggattgatttggagatggctcaaactcttatagacaagttatatcttgttcctgggaca
gagctagatatagtactactgggtggacctgaaccatgggaccatggagttgaatttttt
gaaagtgtagatgcttttactgaggatgataagcccctcaaagatggacctctaattaat
caggcatcaactggtaatttaaggctgttcagaatctcatgccacacaataaggaattat
aaactggttttctcaagagggaacttggttggggatggacaccctcagcctgctgtagca
aacttagaggtgttcctcatttgtagcattccttctttgatcacactcattgtaaatgaa
cctgtgaataaacctgattttatacgttcagctattcaagctgatcgtggaccagggaaa
attcgtgtttctccaattagcgttgcaaacagctgcactatccgagtagctgctgttggt
gtccatgactcaggcagcgcctttgcaaactcatcatctctttgcttgcagtgggaattg
agtggctgtgagcaactggcatactggaaggaatcggatcatcgtgaaagatctgaatgc
aattgggagaggtttttggttttgcaaaatgcaacaggactgtgtgttgttcaagctaca
gtaaggggcctatctggtgcaacccccattcatctcttggatgaggtgtctttcctgcta
gaaagttcaaaaaaggatctcactgatggtgtacgtttacagttggtttcttccctgaga
attattccacagtcaatcttattgttttttgatcctcatgcaaaggcaaagttgtctatt
attggcgggacctgttttcttgaggctatggtgaatgattccaatgttgtggagataatt
caaccaccggcaagtacccattgctccagcttgaggcttagccccaaggggctgggaact
gcccttatcactgttcacgatgtaggactcactcctgctattgccgcctcttccatggtc
caagtggcagatgttgactggtttaagattgtttctcaagaagaaatcagcctcatggaa
ggaactattcaacagtttgatgtgttagctggcatccgtgatggaagcatctttgaccct
tctcagtatgtcaatatgcatattcatgtgcatattgaggatggcgtacttgatcttgtt
gacaaagatggcttctctagacctgtttgtgaggagattcaggggccgacattttttatt
cgagcggcacaacttggggttaccactcttcatgtttctgcaaggcgacagtcgggacat
gaattattaagccaacttgttaaggtggaagtgtatgcaccactacaactgcttccagaa
gacattttcctttcaccaggtgcatcatatgtgcttaccgtaaggggaggacctatgatt
ggagcagtggtggagtatgtttcaatggatgatgaaattgccaaagtacatagatcttca
ggaaggctttcagcagtttctgaaggaaacactagcatacatgctacagcttatgggcat
gaaggtgcaatgatttgtcaggcatatggaagggtggaagttggaatcccatccaaaatg
gttttgaatcttcaaagtgaaaagcttggtgttggtcatgatatgaaactttttatttct
tctgcagagggcaatttattttccttctatgagctttgcaagaattacgagtggaaaatt
gacaatgaccaggtgttgagctttcaaacgctgggaccatctaattataatgatcttggt
ttcatgaatgtagtgtttggaaggtcagcaggcaaatcacatatacatgtttcattctct
tgtgattttgtttcctctggatcattccgacactctgtatcttataatgcttctgggtca
ttattggtggtttctgaaccccctttggctctgggagtgccgatcacatgggttcttcca
cccttctacacttcatctgatcttttaccggcaccgatagaatcatacaatgaatgggat
gctcgaaacagaaaaggagctatcagctattctcttttgaggacttgtggaggaaaaact
gatttcagacagcaggatagcatttcaattgttggtggaaggattaagacaaaagaaagt
gataaccttgcttgcattcaggcaaaggacctcacaacaggaaatactgcaattgcttca
tgtgttcgggtggctgaggtatctcaagtccaagtaactactaaagatttccctttccat
gtggctgaagtagctcctggtgctgaagttgaacttcttgtaagcttgcgagatgcccta
ggttattctttccatgaagcatatggtgtggtgcctctacatattgacaccaattatcct
gatatagtgtctattgaattaccaaaggctgcaaatagaacacaaccaggcgttggaaaa
atatttttgcaggccaaccaccatggaagatctcttatccgtatatcaatgaatgatgat
ccacagaaggcagactatatactgatttctgttggtgctcatttacatcctcaaaatcca
gttcttaatgtgggccatcatctgaacttcaatgtaaccggaagaggaaaaagtgatgta
ggtggccggtggttcagtgccaatgaaagtgttgtatctgttgatatgctatctggggaa
gcacatgctgttggtgaaggttcatctgaagttttcttggaaggctcaactttgaacctg
cgaaccaaagtaatggtgctcagggttgcatcagttttagttgacgctccgggggagact
ttgaccaatgttccttttcctttgaagggatataacttttctgtaagatttagtgactcc
tacagtgataagtttggagcttatggaagcacaggagaatttatgtatgattgtagggtt
gatccatcttttgttgggtatgcaaagccctggagagatcttgatactggcaacaaatat
tgccttttcttcccgtattccccagagcacctggtgcattctatacctaagttgaaggct
gggaaaacagagcttacaagtcactttggtgagggagtactggatatttccgtaattgcc
acattgagagaagaccaagaggtcatggggtctgcccatgctctctttataggaggattt
tcactattgggaaagagcaagttgaatttgaaggcaaactccaataagtgtttgataaca
gtggttggcaatacagatgtggtattctattggactgccagagatagaatattggtaaac
cttcttcacaaagatgaatcagggattggtgggcatgcagagtatgaggttaaagttcta
tatggtcaaagcgttaaagatagacttgttattgttcttccagctacaggacaaaacgcg
gaaattgatatcaattatgaagcagaagatggagatgtacaaaaaatgaaccgtggtatt
atatggactgcgatgttgtggattctattctcatttctagttgcagtcattttcatgagg
tatttttggggcacaccttacactagcagaagatcggtgccagcgactccaacagtttct
gcagctccagtgacacctgagcgtcatcccagtagtggtgatcagacgtccccacgaacg
cctcaaccttatatagagtatataaggaggacaattgacgaaactccatactacaggcga
actgggaggaggtttgatccccaaaacacttattag
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integrated database retrieval system
