Aristolochia californica: 137962231
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Entry
137962231 CDS
T10486
Name
(GenBank) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
acak Aristolochia californica
Pathway
acak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137962231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acak03019
]
137962231
Messenger RNA biogenesis [BR:
acak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137962231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_29
nSTAND3
AAA_5
AAA_28
SMC_N
AAA_15
NACHT
AAA_23
AAA
AAA_22
AAA_30
SRP54
AAA_33
FtsK_SpoIIIE
Zeta_toxin
AAA_25
AAA_16
PduV-EutP
DUF3584
AAA_24
TsaE
G-alpha
Motif
Other DBs
NCBI-GeneID:
137962231
NCBI-ProteinID:
XP_068665079
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MGTGVGQSKDGYASIQVCALQFAYEGQSPFFTKFNLNVSPGSRCLLVGANGSGKTTLLRI
MAGKHMVGGKEVVRVLNSSAFHDTSLVCSGDLAYLGGSWSKSVGSAGEIPLQGDFSAEHM
IFGVEGIDPVRREKLIELLDIDLRWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDL
DVVARLDLLDFFKEECQQRGATIVYATHIFDGLETWATDVAYIQDGELRKAEKLSELCEL
KCASNLLSVVESWLRSETKSTSKNVLNPSSQPSRASPFDTSPLRPSRHMAYYR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggggactggagtcggccagtcgaaggacgggtacgccagcatccaagtatgtgctcta
caattcgcttacgaaggccaatccccgttcttcaccaagttcaatctcaacgtctctccg
ggatcccgatgccttcttgttggagccaatggatccgggaagactactttgttgaggatt
atggcaggaaagcacatggtggggggtaaagaagttgtccgagtgctgaacagttctgct
tttcatgacacttctcttgtttgtagtggcgaccttgcctatctaggaggttcctggagc
aaaagtgttggttccgctggcgaaattccactccaaggagatttctctgctgaacacatg
atttttggagttgaagggatagatccagttaggagagagaagttgattgagctccttgat
attgatttgcggtggcggatgcataaagtttctgatgggcagcgacgcagggtccaaatt
tgcatgggccttcttcatcctttccaggtgcttctgcttgatgaggtcactgttgatctg
gatgttgtagcaagactggatttacttgatttctttaaggaagaatgccagcagagagga
gccacgattgtttatgctactcatatctttgatggcttggagacttgggcaacagatgtt
gcatacatccaagatggtgaattgaggaaagctgaaaaactatcagagctctgtgaattg
aaatgtgcttccaatctgctctctgttgttgagtcatggcttcgatcagaaaccaagtct
acctccaagaatgttttgaatccctcaagccagccctcccgtgcttccccctttgacact
tctcctcttaggccatccagacacatggcctactatcgttag
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