Acanthamoeba castellanii: ACA1_090090
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Entry
ACA1_090090 CDS
T02667
Name
(RefSeq) elongation factor Tu GTP binding domain containing protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_090090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_090090
Spliceosome [BR:
acan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ACA1_090090
Complex C
U5 SnRNP specific factors
ACA1_090090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
Septin
Roc
EF-G_D2
EFL1
Ras
SRPRB
Motif
Other DBs
NCBI-GeneID:
14917252
NCBI-ProteinID:
XP_004338724
UniProt:
L8GXA5
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MEENLYDEFGNYIGPDVDEEEDEEEDGERTGWAEDEDDEDAMKEEPTAPTGQELMSLDNP
SATSSVVLYEDKKYYPTAEEVYGDAETLVQDEDTQPLTVPIVAPVKEFKFDIAEKPATGL
KARQAAAEGQPLDIPPTTYGLDYMLALREHPALVRNVALVGHLHHGKTSFMDTLVQQTHT
KEWRLDRTLRYTDYRTDEQQRGLSIKAVPMTMLLPNGKDKSYLLNIIDTPGHVNFSDEVT
AALRLCDGVVVVIDAVEGVMVQTERMLRHAAQERLPVVVLINKLDRLILELKLPPAEAYY
KLRHTLDEVNMIMDTCYPGGGAPRISPERGNVCFASALMGWSFSLHSFAQIYSETHGSTF
RPADFARRLWGDVYFQPEDRTFKRKPPPGGGMRTFVQFVLEPLYKIYAQVVGEDKPALQR
TLDELGVQLQNKDFHLDTRPLLKLILTQFFGNATGFVDMCVDHLPSPTDAARVKTEHIYT
GPLDTEVASALVRCDTTGPLMVQVTKLYHKADLSAFDALGRVFSGTIRTGQRVKVLGEGY
SMDNEEDMAEREVTNLWVFEGRYRIPVKSAPAGTWVLIEGVDSSIMKTATIVDDNSAEDE
LYVFKPLRFNTVATMKIAVEPINPAELPKMLEGLRKVNKSYPLLTTKVEESGEHVILGTG
EIYLDCVMHDLRNLYSEIEIKVADPVVTFCETVVETSSLKCFAETPNKRNTLTMLSEPME
KGLAEAIESGALLNTKWNSKEFMGFFRERFEWDVLAARSIWAFGPEPLTGPNILVDDTLP
EETNKALLSSVRDSVVQGFQWATREGPLCEEPIRNVKFRLLNAQLAPEPIHRGGGQIIPT
SRRVAYSSFLLATPRLMEPVYYVEIQAPADCVAPIYTVLSRRRGHVTQDEPKPGTPLYTV
KAYIPVIESFGFETDLRAHTQGQAFCVSVFDHWEIVPGDPLDKSIVLRPLEPAPIPSLAR
EFMVKTRRRKGLSEDVSVNTFFSEEMLLQMAAQGM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaacctgtacgacgagttcggcaattacatcggacccgacgtcgatgaggag
gaagacgaagaggaggatggagagcgcacgggatgggccgaggatgaagacgatgaggat
gcgatgaaggaggagcccactgcgccaacggggcaggaattaatgtcgctcgataatcca
tcggccacgtcgtcggtcgtgctgtacgaagacaagaagtactacccgactgccgaggag
gtctacggcgacgccgagacgctggtccaagatgaggatacccagccgctcaccgtgccc
atcgtggcgcccgtcaaggaattcaaattcgacatcgcagagaagccggcgacggggctc
aaggctcgacaagccgcggccgaggggcagccactcgacatcccccctaccacctacggc
ctcgattacatgctggccctgcgcgagcatccggcgctggtgcgaaatgtggcgctggtc
ggacatctgcatcacggcaagacctccttcatggacacgctcgtgcagcagacccacacg
aaggagtggcggctcgaccgcaccctgcgctacacggactaccgaaccgacgagcagcag
cgcggcctgtcgatcaaggccgtgcccatgaccatgctcctgcccaacggcaaggacaag
tcctacctcctcaacatcatcgacacacccggccacgtcaacttctccgacgaggtcacc
gccgcgctccgcctgtgcgacggcgtggtggtggtgatcgacgccgtcgagggcgtcatg
gtgcagaccgagcgcatgctgaggcacgccgcgcaggagcggctgcccgtggtcgtgctc
atcaacaagctcgaccgcctcatcctcgagctcaagctgccgcccgccgaagcctactac
aagctgcgacacacgctcgacgaggtcaacatgatcatggacacctgctaccccggcggc
ggagcgccccgcatctcgcccgagcgcggcaacgtttgcttcgcgagcgcgctcatgggc
tggtccttcagcctccactccttcgcgcagatctactccgagacccacggcagcaccttc
cgaccggccgacttcgcgcgccggctgtggggcgacgtctacttccagcccgaggaccgc
accttcaagcgcaagccgcctcccggcggcggtatgcgcacgttcgtgcagttcgtgctc
gagcccctgtacaagatctacgcccaggtggtcggcgaggacaagccggcgctccagcgc
acgctcgacgagctgggcgtgcagctgcagaacaaggacttccacctcgacacccgacca
ctgctcaagctcatcctcacgcagttcttcggcaacgccaccggcttcgtcgacatgtgc
gtcgaccatctgccctcgccgaccgacgccgcgcgcgtcaagaccgagcacatctacacg
ggaccgctcgacaccgaagtggcctcggcgctcgtgcgctgcgacaccactggcccgctg
atggtgcaggtgacgaagctctaccacaaggccgacctgtcggcctttgatgcgctcggt
cgcgtgttcagcggcacgatccgcacgggccagcgggtcaaggtgctgggcgagggctac
agcatggacaacgaggaggacatggccgagcgcgaggtcaccaatctgtgggtgttcgag
ggccgctaccgtatccccgtcaagagcgcgccggccggcacgtgggtgctcatcgagggc
gtcgactcgtcgatcatgaagaccgcgacgatcgtggatgacaacagcgcggaggacgag
ctgtacgtcttcaagccgctgcgcttcaacactgtggcgacgatgaagatcgcggtggag
ccgatcaaccccgccgagctgcccaagatgctggagggcctgcgaaaggtgaacaagagc
tacccgctgctgacgaccaaggtggaggagtcaggcgagcacgtgatcctgggcacgggc
gagatctacctcgactgcgtcatgcacgacctcaggaacctgtactcggagatcgagatc
aaggtggccgacccggtggtcaccttctgcgagaccgtcgtggagacctcgtcgctcaag
tgcttcgccgagacgcccaacaagcgcaacacgctcaccatgctctcggagcccatggag
aagggcctggccgaggccatcgagagcggggcgctcctgaacaccaagtggaacagcaag
gagttcatgggcttcttccgcgagcggttcgagtgggacgtgctcgccgcgcgatccatc
tgggccttcggccccgagcccctcacgggaccaaatattttggtcgacgacacgctgccc
gaggagaccaacaaggcgctcctctcgtcggtgcgcgactcagtcgtgcagggcttccag
tgggccacccgcgagggtcccctgtgcgaggagcccatccgcaacgtcaagttccgcctc
ctcaacgcccagctcgcccccgagcccatccaccgcggcggcggccagatcatccccacc
tcgcgccgcgtcgcctactcctcgttcctcctcgccaccccgcgcctcatggagcccgtc
tactacgtcgagatccaggcccccgccgactgcgtcgcccccatctacaccgtcctctcc
cgtcgccgcggccacgtcacccaggacgagcccaagcccggcaccccgctctacaccgtc
aaggcctacatccccgtcatcgagtccttcggcttcgagaccgacctccgcgcccacacc
cagggccaggccttctgcgtctccgtcttcgaccactgggagatcgtacccggcgacccc
ctcgacaagtccatcgtcctccggccgctcgagcccgcccccatcccctccctcgcccgc
gagttcatggtcaagaccaggaggaggaagggcctctccgaggacgtctccgtcaacacc
ttcttctccgaggagatgctcctccagatggccgcccagggcatgtag
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