Antrostomus carolinensis (chuck-will's-widow): 104521568
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Entry
104521568 CDS
T08541
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104521568 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acar03041
]
104521568 (EFTUD2)
Spliceosome [BR:
acar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104521568 (EFTUD2)
Complex C
U5 SnRNP specific factors
104521568 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
Motif
Other DBs
NCBI-GeneID:
104521568
NCBI-ProteinID:
XP_010161914
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MYNTEPVASGVCKALWCPQYLNVSVGWLQLEDDDDDDDMGDHDEDHPGMEVVLHEDKKYY
PTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNS
ELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPV
TIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHA
VQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGN
VCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQ
RSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGE
FTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDD
GVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPA
GNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDG
LRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETV
VETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDL
LAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCDELIRN
VKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAV
YTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQI
VPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDV
VLNYPM
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaccgagcctgtagcttctggggtttgtaaagcactttggtgcccccagtac
ctaaatgtgagtgttggttggttgcagctcgaggatgatgacgatgatgatgatatgggg
gatcacgatgaggaccaccctgggatggaggtggtgctgcatgaggataagaaatactat
cccaccgccgaggaggtctacgggcccgaggtggagacgatagtacaggaggaagacacg
cagcctctcactgagcctattattaaacctgtgaaaaccaaaaaattctctctgatggag
cagacgttgccggtcactgtctatgagatggatttcctggcagatctgatggacaactcg
gagctcattcgaaatgtgactctgtgtgggcaccttcaccacggcaagacttgttttgtt
gactgcctgatagaacagacacaccccgaaatccggaagcgctacgaccaggacctttgc
tacactgatatattgttcacagagcaagagaggggagtggggatcaagagcacaccagtg
accattgttctgccagacaccaaaggaaaatcttttctcttcaacatcatcgacactcca
ggtcacgtcaatttttctgatgaggtgacagccggcctgcgcatttccgacggcgttgta
ctttttatcgatgcggctgagggggtgatgctgaacacagagaggctgattaagcacgcg
gtgcaggaaaggctcgcggtgaccgtctgcatcaacaagatagatcggctgatcctggag
ctgaaattgcctcctacagatgcttattacaaactcagacacatcgtagatgaggttaat
ggtctgatcagcatgtattccaccgatgagaacctcgttctgtctccccttctggggaac
gtgtgtttctccagttcacagtacagcatctgcttcacgctgggatcttttgcaaagatt
tatgcagacacatatggagacatcaattaccaggagtttgcaaagcggctgtggggtgac
atctacttcaaccccaagacccgcaagttcactaaaaaggccccaaccagcagttcccag
cgcagttttgtggagttcattctggagcccctgtacaagatcttggctcaggtggtgggg
gatgtggacacgaccctgcccaggactctggatgaacttggcatccacctcaccaaagag
gaactgaaattgaacattcggcccctcctgcggctcgtctgcaagaagttctttggggaa
ttcacaggctttgtggacatgtgtgtgcagcacatcccctccccaaaggtgggagccaag
acgaagattgaacacacctacactggtggtgtcgactcggatctaggggaggccatgagt
gaatgcgaccctgacggtccgctgatgtgtcacacaacaaaaatgtacagcacagacgac
ggcgttcagttccacgccttcggcagagtgctcagtggtaccatccatgctgggcaacct
gtgaaagtccttggagaaaactacaccctggaagatgaggaggattcccagatctgcacc
gtcggacgcctctggatctcggttgcgaggtatcacattgaggtaaacagagttcctgct
ggcaactgggtgctgatagaaggcgtggaccaacccatagtgaagactgcaaccatcacg
gagcctcggggcaacgaggaggctcagatcttccgtccgttgaagttcaacaccacgtct
gttatcaaaatagctgtagagccagtcaacccctcagagctccccaaaatgttagatggt
ctccgcaaagtcaacaagagttacccctcgctcactactaaggtggaagagtctggggag
cacgtgatcctggggacaggagagctctacctggattgtgtgatgcacgatctgcggaag
atgtattcagagatcgatatcaaggtcgctgatccagtcgtgacattctgcgagacagtg
gtggaaacatcctccctcaagtgctttgctgagacacccaacaagaagaacaagatcacg
atgattgctgagcctctggagaagggactcgctgaggacattgaaaatgaagtggtacag
ataacgtggaacagaaagaagctgggtgaattcttccagaccaaatacgactgggatttg
ctggctgcccgttccatctgggcctttgggccagacgccactggccccaacatcctcgta
gacgatacgctgccctcagaggtggacaagtcactgctgggctctgtgaaggacagcatt
gtgcaggggtttcagtgggggaccagggaagggcctctctgtgatgaactgatccgcaac
gtgaagtttaagatcctggacgcagtgattgctcaggagcccttgcaccggggtggagga
cagatcatcccgacggcccggagagtcgtgtattctgctttcctgatggccaccccacgc
ctgatggagccgtactactttgtggaggtgcaggctcctgccgactgcgtgtccgcggtg
tacacggtcctggccaggcgcagaggccacgtaacacaagatgctccaatcccgggctct
cctctctacaccatcaaagccttcatcccagccatcgattcatttgggtttgagacagac
ctgaggacccacacgcaaggacaagccttctcgctctctgtcttccaccactggcagatt
gtgcctggtgaccccttggacaagagcatcgtcatccgacccctggagccccagcctgcc
ccacatctggccagagagttcatgatcaagaccaggcgtaggaagggcctgagcgaggac
gtgagcatcagcaagttcttcgatgaccccatgttgctggagttggccaagcaagacgtc
gttctcaactaccccatgtga
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