Antrostomus carolinensis (chuck-will's-widow): 104523316
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Entry
104523316 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104523316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acar03036
]
104523316
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104523316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINT_MID
MINT_RID
SPOC
Motif
Other DBs
NCBI-GeneID:
104523316
NCBI-ProteinID:
XP_010164154
LinkDB
All DBs
Position
Unknown
AA seq
2953 aa
AA seq
DB search
RDERRGSYEYAPDRTYYETVRTPGTYPEDPRREYPARGREFYAEWDPYQGDYYDPRYYDD
PREYRDYRGDPYEQDIREYSYRQRERERERERFESDRDRDHERRPIERSQSPTHSRRPQS
PGASPSQSERLQSDSERRIYSRSSDRSGSCSSLSPPRYDKLDKARVERYAKNEKPEKERV
FEQERADKEKRLVRKEKPEKLEKEKTDKQKRKAKIHSPSSQSSETDQENEREPSPEKLKG
NSKQSKERGDKEGTAKNRLELMPCVVLTRVKEKEGKVIDQPSLEKLRAKLDNDTMKSPLL
EQKTQTSQAEQTKPDQSKLEPVRTKVQKDKALASHVEVVDKEGKLKPKKHLKTEQTSEGA
NAVDLDKLEARKRRFADANLKPDRQKLEVKRSSQDEEDARVVLKKQLDATASSREATVLR
EGELERKPLRKEILKRESKKLKLERLIPVTSPKEIQETLNVGGIGMRPTLDLQARLMEAA
DEPVEVQELSSKKLNPVKPQHKQAQVLDDQGTEREDTRKNYSGLPEDTPDHKLGQEKPQS
ADTEEKIGIDIDHTQSYRKQMEQSRRLKQQLEMEIAKSEKFGSPKKDVDDYERRSLVHEV
GKPPQDVTDDSPPSKRKKTDQFDFEISTKRERNYRSSRQVSEDSERTSCSPSIRHFPFHE
DDDTLDSPRLMPLKETKESPKIEEKGLSYSNVTVREDSLKFNPYDSSRREQMAEMAKIKL
SVLSSEDDSSRWETQVKQEPGRVDISFPSSIVKRDSIRKRSVRDLEPGEVPSDSDDDSEN
KPHSPKASSLLESSRLSFLLRDREEKLREREERLSSSLERNKFYSFALDKTITPDTKALL
ERAKSLSSSREENWSFLDWDSRFASFRNNKDKEKVDSAPRPIPSWYMKKKKIRTDSEGGK
LDDKKEDHKEEEQERQELFASRFLHSSIFEQDSKRLQHLERKDDDLDFISGRLYGRQSSS
DGTNSAADLVQEPVVLFHSRFIELTRMQQKEKEKDQKPKEVEKQEDKENRPKTPETVPDS
KEPEHKTSSVVGSSSVVVLPQEPAPVASEKVANEKIAVETASVKEEKPSEPASTAEEQKP
FPELAAPVKIEPPEQTEPPPVVEATKEVVATTLALEEDAVATEHPSYLDTKPPTPGTSFS
QVDIVVDPEPEGAQLTPPLPKLVQKSDEVAEPKEENPPPSANADISGGQKVEVAAEVLPP
VSDNDMEVEPPVVVKDKKSYKSKRSKTPVQSAAANVTEKPVTRKSERIDREKLKRSSSPR
GETQKLSELKVEAEKVSRNAAKSPSSAAEPENVEPSLPIGRTRRRNVRSVYATTGDNEGP
SPVKDSMEITRSTRKRGEKEPQETVTTVPTTPRRGRPPKTRRKPEEEISPIKTEPVQQEV
EETETKDAVEAPKPAEGWRSPRSQKLTHSHSSAATSQQGKKGKNEPKPDTSAESEDGAER
SGQELSVGDISNKAKATEKEPAVSEQKRDRKELDVEKNQLEIPTVEIIEKKPVPEKVTKS
KRGRYKNTKTVVDKASVCLKNVEIRLNVDEVKGALRPTEEEAEPVAVSPAKMKSPHKEDV
LPSHFVKNEVEDSFPETEKEVLREPKQSPEAAQLAKQIELEQAVENIAKLTETPPAIAAY
KEPTTDVVPEVRQEEEGDKPAHQASETELAAAIGSIINDISGETESFPAPPTYPAESEAE
IPTEPLVLPSPREEMEPETDQAVNNILETEAAVEPAVQPVPGSAPLAVETESKEAEVSFS
ESSNSAQEAETLQEAEVARKEKGRQKTTRQRRKRSTGRKGDVAEVNAFEPERVQSKSPPD
SEVKTKPEDVSKEEKQPKNTAQVSLEPSASDTGKTVATDVVVATHEAVVESNASPKAPAP
APLDLVTPPVPLDEGSQSGFKIRSPMENAPITPPSAPSAPNAALLTVPSAAAKLPSPAPT
TIVPVHSGAAKVPEWMVRHEEPRAHSTPPPALPPDTKASDIETNSSTLRKILMEPKYVSA
TSITSTHVTXXXXXXXXEPVSAPRLEEAPLHPAVEAIKPISEEKPAVPVTNALDPPVAEA
PVFSEKEKISTVIAPKATSVISRMPHSVDLEEAPRITLVKQAPQTQTCLVNAPSPKFKQR
SSTNDNSRFHPGSMSIIEERPVETGSSPGLRVNTSEGVVLLSYSGQKTEGPQRISAKISQ
IPPASAVDIELQQSVSKSQIKQEPITPSQPTPKGSQTSAGYGTVSTHSSLVLGTQPYNTS
PVISSVKQERAALEKSDSSHLSVQTPASQPSKVLTQSVNTPPVLVHNQMVVNKKLSDPAA
LKVETKTLQPSNLSPGVSPHHSSLSGKIHSEANHVSSGPSTPTDRAISHLGVTKQEPHSP
RTSGHSPSPFPRACHPGSTSSPALSSSTPVMLAPGIPVPQYISSMHPEQSVIMPPHSVTQ
TVSLGHLSQGEVRMNTPPLSGIPYGIRPEALHSPRASLQPQIEIKPQRSSTPQPAPIRDI
VMPPLSSQHPPEEEMHYHHTTVCRGPAPVQSDVLVMQPDYRMHPTSIRLDQYNVPRDVRM
IMHPHMAAVGEHHSETRQSRTPEGAVKTPPVSKTPQPGKETPKSSEGKMAHSPHSEPRLL
SVPSSSQLPGLPLTQPVVVPHGVQIMHPAGSSFHDYRSVYGDMRNYHTAAQLGHPQFPGA
SPIGLPSRSMTPSQGLPEGEHSHPNQPVRSKTPQIPQDPKGQPAAGPEQSHHPTVNRHPA
PIDPHVHLQRGQGDTGQTSYPSPVAISMKQELPSPHQPQTVPKQSMFIPTTSGPGAPPGL
PLNRPEPQSALKQEPSPHPVSQRPVDMVQLLTKYPIVWQGLLALKNDTAAVQLHFVSGNN
VLAHRSLPAPEGGPPLRIAQRMRLEASQLEGVARRMMVESDYCLLLALPCGRDQEDVVNQ
TESLKAAFISYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASIS
NISPHLMIVIASV
NT seq
8863 nt
NT seq
+upstream
nt +downstream
nt
cagagatgaaagaagaggatcttacgaatatgcccctgatcgtacttactacgagactgt
tcggactccagggacgtatcctgaagatcctcggcgagaatatccagctcgaggcagaga
attttacgctgagtgggatccctaccaaggagattactacgacccgcgatactacgacga
tccgcgcgagtacagggattacagaggcgatccttacgagcaggacatcagggagtacag
ttacaggcaacgggagagagagagggaaagggaacggttcgaatccgatcgcgacagaga
ccacgaacggagaccgattgaacggagccagagtccgactcactccaggcgtccgcagag
ccctggagcttctccttcgcaatcggaaaggctgcagagcgattcggagaggaggattta
cagcaggtcatcggatcgtagcggcagctgcagctctctgtctcctccacgatacgacaa
gctggacaaggcacgcgtagaacgttacgcaaaaaacgagaagccggagaaagagcgcgt
tttcgaacaggagagagcggacaaggagaaacgcttggtgagaaaggaaaagccagaaaa
actagaaaaggaaaaaacagataagcaaaaaagaaaagccaaaatccattcgcccagctc
tcagtcttctgaaacggatcaagaaaatgagagagagcccagccctgaaaaattgaaggg
caacagtaaacaaagtaaagagagaggtgacaaagaagggacagcgaaaaaccgcctgga
actgatgccctgcgtcgtcttgacccgagtcaaagaaaaggaagggaaagttattgatca
accctctttggagaaactgagagcaaagcttgataatgacacgatgaagtcgccgcttct
tgaacagaaaacgcagacatctcaagctgagcaaaccaaacctgatcagtccaaactgga
acctgtcagaaccaaggtacaaaaagacaaagctcttgccagtcacgtcgaagtggtgga
taaggagggaaaattgaaacccaaaaagcacttgaagacagagcaaacttccgagggggc
caacgcggtagatttagacaagttggaggctcgtaaaagacgttttgccgacgcaaatct
aaagcctgacaggcaaaaactggaagtaaaaagaagcagccaagatgaggaggatgcgcg
cgtggttttgaaaaagcagctcgatgcgacggcttcgtctagagaagcgacagtgttaag
ggaaggagaattggagagaaaacccctgaggaaggagatacttaaaagggaatctaaaaa
actcaaactggaaagacttattcctgttactagtcccaaagaaattcaggagactcttaa
cgtcggtgggattggcatgcgtcccaccctagatctgcaggccaggctaatggaggcggc
cgatgaaccggtggaagttcaggaactttcttctaaaaaactgaacccggtaaaacccca
gcataaacaggcacaggtactagatgaccaaggaacagagagagaggacacaaggaagaa
ttactctggtcttcctgaagacacacctgaccataaacttggccaagagaaacctcagtc
ggctgatacagaggagaagatcggcattgacattgaccacacgcaaagctacaggaagca
aatggagcagagtcgcaggttaaaacagcagctggaaatggagatagccaagtctgagaa
gttcggcagtccaaagaaagatgtggatgactatgaacgacggagcttggtccacgaggt
gggaaaacctccgcaagacgtcaccgatgattctccaccgagtaaaaggaaaaagactga
ccagtttgactttgaaattagcactaaaagagaaagaaactacagaagttctcgtcaggt
gagtgaggactccgaaaggacgtcctgttcccctagtatcagacacttccctttccatga
agacgatgacacgctcgattctccgaggctgatgccattaaaggaaaccaaagagtcgcc
taaaatagaagaaaaaggtctttcttactccaacgtgactgtgagagaggactcgctgaa
atttaatccttacgattccagcagaagggagcagatggcagaaatggctaaaataaaact
ctccgtgctgagttctgaagatgactcgagtaggtgggaaacacaagtgaagcaggagcc
tggtagagtcgatatcagctttccaagcagcatcgtcaaaagagacagcatacgcaagcg
atctgtccgagacctggaacccggggaggtgccttcagattcagatgatgacagtgaaaa
caaaccccattccccgaaagcttcgtccttgttagagagttccaggttgtcttttttatt
aagggacagagaagaaaagttacgtgaaagagaggaaagactgtcaagttccttagagag
aaataaattttactcttttgcgttggacaagacaatcacaccagacacaaaggccttgct
ggaaagagctaaatctctctcttcctccagagaagaaaactggtcctttctagattggga
ttcaagatttgctagttttagaaacaataaagacaaagagaaggttgactcggctccgag
accgattccatcttggtatatgaaaaagaaaaaaatcaggactgattcagaaggtggaaa
actggatgataagaaagaagatcataaagaggaggaacaagagagacaggaactgtttgc
ttctcggtttttgcatagttccatctttgaacaggactccaaacgcctgcagcatttaga
gagaaaagacgacgatctcgacttcatttctggtagattgtacgggagacaatcttcttc
tgatgggactaacagcgcggctgatttggtgcaagaacccgtggttcttttccacagtag
atttattgaactgacccgaatgcagcagaaagaaaaggagaaggatcagaaaccaaaaga
agtggaaaaacaggaagataaagaaaaccgaccgaaaacaccagaaacagttcctgatag
taaagaaccagaacataaaacttcctcggtggttggttcctcttcggtcgttgtcctacc
acaggaaccagcaccggttgcttctgagaaggtagcaaatgagaagatagcggtggaaac
agcttctgtaaaagaagaaaaaccatctgaacctgcttctacagcagaggaacaaaaacc
ttttcctgaacttgctgctcctgttaaaatagaaccacctgagcaaaccgaacccccgcc
ggtcgtagaagctactaaagaagttgttgctacaaccctggcactggaggaagatgctgt
ggcaacagagcatccttcatacttagataccaaacctcctactcctggaacttccttttc
ccaagtagacatcgttgtagatccagaacctgaaggtgcccagttaactccacctctgcc
caagctagttcagaagtcagatgaggttgctgagcctaaggaagaaaatcctccaccttc
tgccaacgctgatattagtgggggtcaaaaagtggaggtggccgctgaggtcctgcctcc
tgtttctgacaatgatatggaagttgaacctccagttgttgtaaaagataaaaaatccta
caagagtaaacgttccaagactcccgtgcagtcggctgctgctaacgtcacggaaaagcc
cgtcacgaggaagagcgaaagaattgaccgtgaaaagctcaaaaggtcgagctctcctcg
tggggagacgcagaagctttctgaattgaaagtggaagctgagaaggtttcaaggaacgc
tgctaaatcccctagttctgctgcagagccggaaaacgtggagcccagcttgccaatagg
ccggactaggcgccgaaacgtacggtcagtctacgctactacgggggacaatgaaggccc
atctccggtgaaggactccatggagatcactagatccaccaggaagagaggtgaaaagga
accacaggaaacagtgacaaccgttcctacgaccccaaggaggggaagacctccaaaaac
ccgccgtaagccggaggaggagatctctccaataaagacagaaccggtacagcaagaggt
ggaggagactgaaactaaagatgctgtggaagctcctaagcctgctgaaggttggaggtc
tcctagatctcagaagctaacacacagtcactcatcagctgctaccagccaacaagggaa
gaaagggaagaatgaaccaaaacccgatacctcagctgaatctgaagatggtgctgagag
aagcggtcaggagttgagcgttggtgacatcagcaataaagcaaaagccactgagaaaga
accggcagtgagcgagcagaaacgtgataggaaagaactggatgtggagaaaaaccagct
agaaatccccacggttgagatcatcgagaagaagccagtgccagaaaaggttacgaaatc
caaaaggggaaggtataaaaataccaaaaccgtcgtagataaagcgtccgtgtgtctcaa
aaacgtggaaatacgcctcaacgtggacgaagtcaagggcgccttgcggccgacggagga
ggaggcagagccggtggccgtgtcaccagccaaaatgaagagccctcacaaagaggacgt
cttaccatcccattttgttaagaatgaggtagaagattcattcccagaaacagaaaaaga
ggtgttacgggaaccaaagcaatcccccgaagctgctcagttagcaaagcagatcgaact
tgagcaagctgtggagaacatcgccaagctcaccgaaacgcccccggcaatcgctgccta
caaagagccgacgacagacgtcgtgcctgaagttcgtcaggaggaggaaggagataaacc
agcccatcaggctagtgaaacggagctggcagcggccatcggctccatcatcaatgatat
ttctggggaaactgaaagttttcctgcacccccgacgtatcccgctgaatcggaagctga
aatccctacggagcctttggtgttgccgtcgcctcgggaggagatggagcccgaaacgga
tcaggcagtgaataatatcctagaaactgaggctgccgtcgagcctgcggtgcaaccggt
ccctggctcagccccgttggccgtagagacggagagtaaggaggctgaagtcagcttcag
cgaatcttccaactctgcgcaggaggccgagaccttgcaggaggctgaagttgctcggaa
ggaaaagggccgtcagaaaaccacgcgacagagacgtaaaaggagcacgggcaggaaggg
ggatgtcgctgaagtcaacgccttcgagccggagagggtgcagagcaagtcaccccccga
cagcgaagtgaagacaaaacctgaagatgtctcaaaggaggagaagcaacctaaaaacac
agctcaggtgtccctggagccgagtgcttccgacaccggcaagactgtggccactgatgt
tgtcgtggccacgcacgaagctgttgttgagagcaacgcttctccaaaagctcccgctcc
agctcctctggacctggtcaccccaccagttcccctcgatgaagggagtcagagcgggtt
caagatacggtcgcccatggagaacgcgcccatcacaccacccagcgctcccagtgcccc
aaacgccgcccttctcactgtcccttcggcagcggccaaactgcccagcccagcacccac
cacgattgtccccgttcactccggtgctgccaaggtgcccgagtggatggtcagacatga
agaaccccgcgcccattccacaccaccacctgctctccctccagacacgaaagcatcaga
tatcgaaacaaactccagtactttgaggaagatactcatggaacccaagtacgtctcggc
aacgagcataacctccacgcacgtgacgnnnnnnnnnnnnnnnnnnnnnnncgagccggt
gagcgcgcctcgtttggaggaggcacctcttcaccccgcggtagaggccatcaaaccgat
ttcagaggagaagccagcagttcctgtcaccaacgccttggacccaccggtggctgaagc
acccgtgttcagcgagaaggaaaagataagtactgtgattgctcccaaagctacttctgt
gataagcaggatgccccacagcgtagatctggaggaagctccaaggatcaccttggtgaa
gcaagctcctcaaacccagacgtgtctcgtcaacgccccctcgccaaaatttaagcagag
gtcgagcacaaatgataacagtagatttcatccaggatctatgtctattattgaggagag
gcctgtagagactgggtccagtccagggctgcgggtgaacacctcagaaggcgtcgtgct
tctgagttactcggggcagaaaacagaaggtcctcaacgaattagtgccaaaatcagcca
gattcccccagccagcgctgttgacatagagttgcaacaatctgtatccaagtctcagat
taaacaagaacctatcacaccatctcagccgacgccgaaaggctcccagacctcggcagg
ctacgggactgtttccacccattcttctttggtactaggaactcaaccttataatacgtc
acctgtcatctcctctgttaaacaagagcgtgctgcactggagaagtccgactcgtccca
cctttctgtccaaactccagcatctcagcccagtaaagtcctcactcagtctgtaaacac
tccacccgtactcgtccacaaccagatggttgtgaacaaaaaactgtccgatccagcagc
tctaaaagtggagaccaagactctacaaccttccaacttgagtcctggagtcagtcctca
ccactcttccctctctgggaaaatacattcggaagcaaatcacgtcagctcgggacccag
caccccaactgacagggctatttcccacttgggggtcaccaaacaggagcctcactcgcc
gcgtacgagtggacactcgccgtcgccgttcccccgggcttgtcatcccggcagtacctc
ctctccggctttatcgagcagtaccccagtcatgctggctccaggtattcccgttcctca
gtacatatccagcatgcatcccgagcaatctgtcatcatgccccctcacagcgtaacgca
gacggtgtccctgggccatctgtcccaaggtgaggtgaggatgaacacccctcctctctc
cggcatcccgtacggtatccgcccggaagcccttcactctcccagagcatctttacaacc
ccagatagaaatcaaacctcaacgatccagcaccccacaaccagctccgatacgggacat
tgtcatgccacctctgtcttctcagcatcctccggaggaggagatgcactaccaccacac
cacggtctgccggggaccagctcccgttcagtctgacgtgctggtgatgcagccagatta
tcgtatgcaccccaccagcatcagacttgaccagtacaacgtccctcgcgacgtcaggat
gatcatgcaccctcacatggccgccgtgggcgagcaccactcggaaacgagacaatcccg
aactcctgaaggagctgtgaaaactcctcccgtcagtaaaaccccacagcctggaaaaga
gacaccaaaatcctcggaaggcaaaatggcacattctcctcacagcgaaccccggctcct
cagcgtcccctccagcagccagctgcctggactgcctctgacgcagccggtggtggtacc
acacggggttcagatcatgcaccccgcagggagctcgtttcacgattatcgatctgttta
tggtgacatgaggaattatcacacggcggcacagctcgggcatcctcagttcccgggtgc
atcgccgattgggttgccttcccggagcatgaccccatctcagggtcttccggagggtga
acactcacaccccaaccagcccgtacgcagcaagactcctcagatcccccaggatcccaa
gggccagccggcagcaggacccgaacagagtcaccaccccactgtaaataggcacccggc
acccatcgaccctcatgtccaccttcagaggggacaaggggacacgggccagacctccta
cccttcacctgtcgccatctcgatgaaacaggagcttccatcaccgcaccaacctcagac
agttcccaagcaatccatgtttatccccaccacgtcgggtcccggagctccaccggggtt
acccctcaatcgccccgaaccccagtctgctctcaaacaggagccgtctcctcaccccgt
gtcacagagacctgtggatatggttcagctcctgacgaaataccccattgtctggcaagg
tcttttggctctaaaaaacgacacggccgctgttcagctccattttgtctctggtaacaa
cgtcctggctcaccggtcgctgccggcgccggagggggggccgccgctgaggatcgccca
gcgcatgcggctggaggcttcgcagctcgagggtgtcgcccgcagaatgatggtggagag
cgattactgcctgttactggccttgccgtgtggccgggaccaggaggacgtggtgaatca
gacggagtctctgaaggccgcgttcatcagttacctgcaggcgaaacaagctgcaggaat
catcaacgtgcccaaccccggctctaaccagcctgcctacgttctgcagatcttcccacc
ctgcgaattttcagaaagccacttatcccgcctcgccccggatctcctcgccagcatctc
caacatctctcctcacctgatgattgtcatcgcgtcggtatga
DBGET
integrated database retrieval system
