Antrostomus carolinensis (chuck-will's-widow): 104525027
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Entry
104525027 CDS
T08541
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04514
Cell adhesion molecules
acar04520
Adherens junction
acar04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104525027 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104525027 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104525027 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acar01009
]
104525027 (PTPRF)
Enzymes [BR:
acar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104525027 (PTPRF)
Protein phosphatases and associated proteins [BR:
acar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104525027 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
V-set
PTP-SAK
DSPc
C2-set_2
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
104525027
NCBI-ProteinID:
XP_028940808
LinkDB
All DBs
Position
Unknown
AA seq
1923 aa
AA seq
DB search
MVPNFCVPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSVSLGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRR
VAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNN
IMQSANYTCVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISY
YVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTG
EQAPSSPPLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDD
SHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRIL
LTWLPASQERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGV
GVYTPTIEARTAQSTPSAPPQEVECISTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVE
GDDNTKHVVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSA
PPRKVEVESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEA
QWRTEDSVDHETVIGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMIST
TAMNTALIQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLF
KLSAKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVN
YTVVYRDINSQQDLVNITKDTSITLINLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPV
EQVFAKNFRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPD
TDYSFVLMNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVR
WYYIVVVPADQSTSSPIARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVD
VLPETFTLGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASA
KQQDEPEMLWVMGPVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDP
VEMRRLNYQTPGMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLE
VNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSD
FWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTF
ALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVG
RTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNT
EVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNI
MPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNST
IVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSR
TIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLS
IVLERMRYEGVVAIWHLWMCNSVARWPWVPASHTFPLAALQDQYQLCYRAALEYLGSFDH
YAT
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatttctgcgtcccagtactcactgtgccagcagccatcctttgctgcttg
atgctgcctttagcaggagcagacagcaagccaacatttatgaaagctcctgaagatcag
attggaatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagccgaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagaggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgcgttcatcgagatgaa
gctatctatgagtgcacagcaaccaatagtgttggggagataaacacgagtgccaaatta
acggtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccacag
ctgaaggtggtggaaaaggctcgcacagccacaatgctctgtgctgccagtggtaaccct
gatcctgaaatctcctggttcaaggacttcctgcctgttgacactgcaacgagcaatggg
cgaatcaagcagctccgctcggtatctctgggtggtacaccgatcagaggagctctgcaa
atagagaacagcgaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagcgca
ggaacccgctactctgccccagcaaacctttacgttcgagatcagcgagaagtgcgacgt
gttgctcctcgattctctattcctccaagcaaccatgaggtgatgcctggggggagcgtg
aacctcacgtgcgtggcagtaggtgctccgatgccctacgtgaagtggatggctggtgtg
gaggaactgaccaaagaggatgagatgcctgtcggtaggaacgtcctggagctgaataat
atcatgcagtctgccaactacacttgcgtggccatctcctcccttggcatgattgaagcc
acagcccagatcactgtcaaagcactgccaaaacctccaacagagccattagtgactgaa
acgacagctaccagcgtgaccctcacctgggattcaggcaactctgaccccatttcatat
tacgtcatccagtacaagcccaaatccttggagggtcagttccaggaggtggatggtgtg
gcaacaacccgttatagcataggtgggctcagccccttctcggagtatgagttccgtgtc
atcgcagtcaataacattggtaggggtccccccagtgagctggtcgaggcacggacagga
gagcaagctccttcaagtccacccctcaaagtccaggcacggatgctgagcgccagcacc
atgctggtccagtgggagcaaccggaggagccaaatggacagatcagagggtaccgtgtt
tactacaccaccgacccacatctgcctttgagtatgtggcagaaacacaacaccgacgac
agccacctcaccaccgtggggagcctcatcacagggaccacgtacagcatccgcgtcctg
gcctttacttcggtgggtgacgggcccccctcggacatcatccaggtcaagacgcagcaa
ggggttcctgcccagccagctgacttccaggcagaagcagagtctgatacccgcatcctg
ttgacgtggctgcctgcctcccaggaacgcattaccaaatacgagctgctgtactgggaa
ggggaggatggcactcagcaaaaggtggagtttgacccaacctcctcgtatgctgtggaa
ggtctcaaaccagacacactgtataaattccgtctgggtgcccgctcagagctgggggta
ggagtctacacccccacaattgaagccagaactgcacaatccaccccctccgccccaccc
caagaagtcgagtgtataagcaccagctccactaccatccgggtaagttgggtgccaccg
cctgcccagagccgcaatggggtcatcacccagtactccattgcgtaccaggcagtggaa
ggagatgacaacaccaagcatgtggtggatggcattggacgggagcactccagctgggag
atcaaggacctggagaaatggaccgagtacaaggtgtgggtaagggctcacactgatgtg
gggcctggaccagagagcatccccgtgcacgtgcgcactgatgaggatgtgcccagtgcc
ccaccacgaaaggtggaggtggagtctgtgaattcgacagccatccgggtgagctggaag
ctgcccatctccaacaagcagcacgggcagatccgtgggtaccaggtcacgtacgtgaag
ctggaaaacaacgagccccgagggcagccagtgatcaaggacgtcatgctgtcagaagca
cagtggagaactgaggactccgtcgaccatgagacggtcattggaggcctgctgccggaa
accacctactctgtcacagtcgctgcctacaccaccaaaggagatggtgcccgcagcaag
ccaaaagtcatcaccaccacaggggcagtcccggggaagcccaccatgatgattagcacg
acagccatgaacacagccctcatccagtggcacccacccaaggagatggtaggggagctg
ctgggttaccggctgcagtacagacgtcttgatgaggaaaagatgaacacgatagacttc
gggaagagagatcatcactacactgtgaccaacctgcataagggggccacgtacctcttc
aagttgtctgccaagaacagagctggcccaggagaagagtttgagaaggagatcactact
gcggaagatgtgccaagcggcttcccacagaacctgcgtgtggtgggtctcaccacttcc
actacagaagttgcatgggacccaccagtcttggcagaaagaaatggcaagatcgtcaac
tacacagtggtatacagggacataaatagccagcaggacctggttaacatcaccaaggac
acaagtatcactttgattaatttgaagcctgataccacttatgatataaaagtgagggcc
cgcaccaataagggggttgggccgctcagccccagcatccagtcccggaccatgcctgtt
gagcaagtgtttgctaagaacttccgcgtcaatgctgtcatgaaaacgtctgtgttgctg
agctgggaagtgcctgactcctataaatctgcagtgccttttaagattctgtacaatagc
cagagtgtggaggtggacggccactcgatgaagaaactcataagtgacctgcagccggac
acggactattcttttgtgctaatgaaccgcgggagcagtgctggggggctccagcacctc
gtctcaatccgcaccgctcctgatgtcttgcaaagcaaacccattgccacaaacaaatac
atacaagaaggaaaattcacgctcacccttcccaaagtccagacgactgtgccagttagg
tggtactacatcgtggttgtgccagcggatcagagcaccagcagcccaattgctcggtgg
cggacacctgatgagatggagctggaccagctgctggaggccataagccaaggcagtcag
agcaggcgccagcgacgccaagcagacagactcaagccctacattgctgctcaagtggat
gtgctgcctgagaccttcaccctgggggacgagaagaactacaaaggtttctacaacaag
cccttgtctcaagacctgagctatcgctgcttcgtactggcctcgctggaggatggagac
acgaagagatatgcagccagcccctactcggatgagatcgtgatggaagtggcttcagca
aagcagcaggatgaaccagagatgctgtgggtgatggggcccgtcctggccgtgatatta
attatcatcattgtcattgctatactcctcttcaaaaggaaaagggcacactccccctct
tctaaggatgagcactccatcggcctgaaggactcactcttggcccactcctctgaccca
gttgagatgaggcggctcaactaccagactccaggcatgcgcgaccaccctcccatcccc
gtgacggaccttgccgacaacatcgacaggctgaaagccaacgatgggctgaagttctcc
caggagtacgagtccattgatccagggcagcagttcacctgggagaactccaacctggag
gtgaataaaccgaaaaaccgctatgcaaatgtgattgcctatgaccactcacgtgtcatc
ctgacctccatcgatggggtcccaggcagtgattacatcaatgccaattatattgatggg
tatcggaaacagaacgcctacatcgctacgcagggacctctgccagaaaccctcagcgac
ttctggaggatggtgtgggaacagagaacagcaactatagtcatgatgaccagactggag
gagaagtccagggtaaagtgtgaccagtactggccgagccgaggtacagaaacctatggg
atgatccaggtgaccctgctcgacacagtcgagctggcgacctacaccgtccgcaccttt
gcactatacaagaatggctccagtgagaagagagagctgcgacagttccagttcatggct
tggcccgatcacggggtaccagaataccccaccccgatcctagctttcctgcgacgggtc
aaggcctgtaacccaccagatgctgggcccatggttgtccattgcagcgccggcgtgggc
cgaacaggatgctttattgtcattgatgccatgctggagcggatgaagcacgagaagacc
gtggacatctatggccacgtgacatgcatgcgctctcagcgcaactacatggtgcagaca
gaggaccagtacatcttcatccacgaggccttgctggaggcagccacgtgtggcaatacc
gaggtacctgcacgcaacctcttcgctcacatccagaagctgacccaggtgccaccaggc
gagagtgttaccgcaatggagctggaattcaagctgctggccaattctaaagcacatacc
tcacgtttcatcagtgccaacctcccatgcaacaaattcaagaaccgcctcgtgaacatc
atgccatacgagctgacaagagtctgtcttcagcctatccggggtgttgagggctccgat
tacatcaatgccagcttcatagatgggtacaggcaacagaaggcctacatcgccacgcag
ggaccgctggccgagaccacggaggatttctggcggatgctctgggagcacaactccacc
atcgtggtgatgttgacaaagctgcgtgagatgggccgggagaagtgccatcagtactgg
cccgcggagcgctctgcccggtaccagtactttgtcgtggaccccatggcggagtacaac
atgccgcagtacatcctccgggagttcaaggtgacagatgccagggacggccagtcacgg
accatccgccagttccagttcacagactggcctgagcagggcgtgccaaagacgggagag
ggcttcatcgacttcatcgggcaggtgcacaagaccaaggagcagtttgggcaggacggg
cccatcacggtgcactgcagcgctggggtcgggcgcacaggcgtgtttatcacactcagc
atcgtgctggagaggatgcgctacgagggggtggtggccatctggcatctctggatgtgc
aactctgttgcccgatggccttgggtccccgcttctcacactttcccccttgctgccttg
caggaccagtaccagctgtgctacagagcggcactggagtatctcggcagcttcgaccac
tatgcaacgtaa
DBGET
integrated database retrieval system
