Antrostomus carolinensis (chuck-will's-widow): 104527558
Help
Entry
104527558 CDS
T08541
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104527558 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acar04040
]
104527558 (TRPC6)
Ion channels [BR:
acar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104527558 (TRPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Motif
Other DBs
NCBI-GeneID:
104527558
NCBI-ProteinID:
XP_010169613
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MFNDRSTSLSLEEERFLDAAEYGNIPVIRKMLEECPSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEGKRLALSPSQSELQQDDF
YAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPHDYFCKCSECNQKQKHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVEKSHSNGEHGRPSLSRLKLAIKYEVKKFVAHPNCQQ
QLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPCSKLGRIMRGPFMKFVA
HAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKTSCFSWMEMLIISWVIGMI
WSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWHASRAQNFVDANMKDLT
SPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLG
RTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTVEESFKTLFWAIFGLSEV
KSVVINYRHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAK
LWFSYFEEGRTLPVPFNLVPSPKSLLYLLLRIKKWISKPFLCQNKSFQEDAEMNKLGQRK
QSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKESDEVNEGELKEIKQDISS
LRYELLEEKSQNSEDLAELIRKLGEKLSIDSKEGESKR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaccgctcaacaagtctttctctggaggaggagcgctttttggatgcagca
gaatatggaaatattccagtgattcgcaaaatgctggaagaatgtccctcactcaatgtg
aactgtgtggactatatgggacagaatgccttgcagctggcggttgccaatgagcacctg
gagatcacagaacttctactgaagaaggagaacctgtctcgggttggggatgccttgctt
ttggctattagcaaaggttatgttcggatagtggaagccatcctaaaccatcctgcattt
gctgaagggaagagacttgccttgagtcctagccagtcagagctccagcaagatgacttc
tatgcgtacgatgaagatggcacacggttttcccatgatgttacaccgatcattctggcc
gctcactgccatgagtatgagattgtacacactctgctgagaaaaggagctcggattgat
agaccacatgactatttctgcaaatgcagtgagtgcaatcagaaacaaaagcatgactct
ttcagccattctaggtcaagaatcaatgcctacaaaggtctggccagccctgcttatctg
tctctgtccagtgaagaccctgtaatgactgcattagagctcagcaatgagttggctgtg
cttgccaacattgaaaaagaatttaagaatgattacaagaaattgtctatgcaatgcaag
gattttgtagttggactccttgatttgtgcagaaatacagaagaagtggaagctattttg
aatggtgatgtagagaagagccatagtaatggagaacatggtcgccccagccttagccgc
ttaaaacttgccattaagtatgaagttaaaaaatttgtagcacatccaaactgccagcaa
cagcttctttcaatctggtatgagaatttgtcaggtttacggcagcagaccatggcagtg
aagtttctggttgttcttgctgttgcggtaggactgccgttcctttcaatggcttactgg
attgctccttgcagtaagctggggaggataatgcgtggaccatttatgaagtttgtagcc
catgcagcctctttcaccatttttcttggtctacttgtcatgaatgcagctgacagattt
gatggcaccaaactccgacctaatgaaacaacaggcaatgtgaaacagctatttaggatg
aaaacatcttgtttctcatggatggagatgctcattatttcttgggtaataggcatgata
tggtctgaatgtaaagaaatttggtctcaaggtccaaaggaatacctttttgagttatgg
aatatgcttgattttggtatgttagcaatttttgcagcatcattcatagcaaggtttatg
gcattttggcatgcatccagagcccagaacttcgttgatgcaaatatgaaagatctgaca
agtccaacactggagcccaacataaaatactacaccttagccagaataaactgggatcca
tccgatcctcagatcatatctgaaggcctgtatgcaattgcagtagtattaagtttctca
agaatagcctacattttaccagctaatgaaagctttggacccctgcagatatcacttggc
agaactgtgaaagacatcttcaagttcatggtgatatttatcatggtgtttgtggctttc
atgataggcatgtttaatctctattcctactatctgggggcaaaacaaaacgaagcattc
acaactgttgaagaaagtttcaagacattgttctgggctatatttggactctcagaagtt
aaatcagttgtcatcaattatagacacaaatttattgaaaacattggttatgtcctttat
ggagtctataatgttaccatggtcattgtcttactgaacatgcttattgcaatgatcaac
agttcattccaggaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaa
ctttggttttcttactttgaagaaggtaggactcttccagtaccgttcaacttagtgcca
agcccaaaatctttgctgtatctcctactcagaatcaaaaaatggatttcaaaaccattt
ctgtgccaaaataaaagctttcaggaagatgcagagatgaacaagcttggtcaaaggaaa
caatcaagtataagaagctcagatgaaatccacttaaacagtttaaacaatcctccaagg
caataccagaaaataatgaagcgtctcattaaaagatatgtactgaaagctcagatagat
aaggaaagtgatgaagtcaatgaaggtgaactgaaggaaattaaacaggacatctcaagt
ctccggtatgaactccttgaggaaaaatctcagaattctgaagatctggcagaacttata
aggaaacttggggaaaaactgtcaattgactctaaggaaggagaaagcaagagataa
DBGET
integrated database retrieval system
