Antrostomus carolinensis (chuck-will's-widow): 104528803
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Entry
104528803 CDS
T08541
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104528803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104528803
Transporters [BR:
acar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104528803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104528803
NCBI-ProteinID:
XP_010171226
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MTLKFTPVDLKQEAQQQASLPPPWPTECYNHTQLAILFTIVALTHQDFSIDDSFCGAFLI
PYILFLIIAGMPLFYMELALGQYNREGAATVWKICPVFKGVGYAVILIALYVGFYYNVII
AWSLYYLFSSFTFELPWTNCDNSWNSPNCTDPKLFNASVLGNGTKYSKYKLTPAAEFYER
GVLHLHESRGIHDLGLPRWQLSLCLLVVVIILFFSLWKGVKTSGKVVWITATLPYVVLFV
LLIHGITLPGAYNGINAYLHIDFRRLKEATVWIDAATQIFYSLGAGFGVLIAFASYNKFD
NNCYRDALLTSTINCVTSFVSGFAIFSILGYMAHEHKVKIEDVATEGAGLVFILYPEAIS
TLSGSTFWAVVFFIMLLTLGIDSSMGGMEAVITGLADDFQILKQHRKLFTFGVSFGTFLL
ALFCITNGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSEDIQQMMGFKPGLY
WRLCWKFVSPAFLLFVVIVSIINFKPLTYDDYTFPVWANRIGWGIALSSMILVPAYIIYK
FMNVRGTFKERLAYCITPENEHQLVAQGNVRQFKLQHWLTI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcaaattcacaccagtggacctaaagcaagaggcccagcagcaagccagtttg
cctcctccctggcccacagaatgttacaatcacacacagttggcaatactttttacgata
gtagccctcacacatcaggatttttctatagatgacagtttctgtggtgcttttcttatt
ccctatatcctcttcctaatcattgctggaatgcccctgttctatatggaattagcactg
ggacagtataaccgagaaggggctgccactgtgtggaaaatctgtccagttttcaaaggt
gtaggctatgcagtgatactcatagctctttacgtgggtttctactacaacgttatcata
gcttggtctctgtattatctattttcatcattcacatttgagctcccctggacaaactgc
gacaacagttggaacagcccaaactgtacagatcccaaactcttcaatgcatcagtgctt
ggcaatggtaccaaatactcgaagtacaagctcactcctgcagctgaattttatgagcga
ggagttctgcacctgcacgaaagccgtggaatccatgaccttggcttgcctcgctggcaa
ctttccctctgcctcttggtggtggtaatcattcttttctttagtctgtggaaaggcgtg
aagacttcaggaaaggttgtttggataacagccactttgccttatgttgtattatttgtc
ttgttaatacatggaataaccctgcctggtgcatacaatggaatcaatgcatacctgcac
atagatttcagaagattaaaagaagccacagtctggattgatgccgctactcagatattt
tactccttaggagccgggtttggcgttttaattgcatttgccagttacaataagtttgac
aacaactgttacagggatgctttgctgactagtaccattaactgtgtcacaagcttcgtc
tcaggatttgcaattttctccatattgggctacatggctcatgagcacaaagttaaaatt
gaggatgtagccactgaaggagctggtttagttttcatcctgtatccagaggcaatttca
actctttcaggatctacattctgggctgtggtattcttcatcatgctccttactcttggc
attgacagttctatgggcggaatggaggctgtcatcactggcttggcagatgatttccaa
attctgaagcagcacagaaagctcttcacctttggtgtttcttttggcactttcctactt
gcccttttttgcatcaccaatggtggaatttatgtgctcacacttctggacacatttgca
gctgggacttcgatattgtttgctgttctaatggaggcaattggagtttcctggttttat
ggagtggacagattcagtgaagatattcaacaaatgatgggcttcaagccaggcctctac
tggagattgtgctggaaatttgttagccctgcttttttattgtttgtcgtgatagtcagc
ataataaatttcaaacctttgacctacgatgactacaccttccctgtctgggcaaatcgc
attggctggggaatagcattatcttcaatgatacttgtgcctgcctatattatctataaa
tttatgaatgtgcgtgggacctttaaagaaagactagcttactgcatcacacctgaaaat
gagcaccaactcgtggcccaaggaaatgtcaggcagtttaagcttcaacactggctaaca
atatga
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