KEGG   Antrostomus carolinensis (chuck-will's-widow): 104532682
Entry
104532682         CDS       T08541                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104532682 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acar03041]
    104532682 (SMNDC1)
Spliceosome [BR:acar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    104532682 (SMNDC1)
 Complex B
    104532682 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    104532682 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 104532682
NCBI-ProteinID: XP_010176247
UniProt: A0A094MHC2
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaggaccttgctaagcagttagctagctacaaagctcagcttcagcaagttgag
gctgccttatctgggaatgcagaaaatgaagacttactaaaactgaagaaggacttacag
gaagtcatagaattaaccaaagatctcctttcaacacaaccttcagaaactcttgcaagt
tctgacagttctgcttctgctctgcccagtcactcctggaaggttggagataggtgtatg
gcgatatggagtgaggatggacagtgttatgaagctgagattgaagaaatagacgaggag
aatggaacagctgcggtcacatttgctggatatggcaatgctgaagtcacccccctcttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcagcgagagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcagcag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcccctgagagcgtaactggcaaggttggagttggaacatgtggaattgcagacaaaccg
atgacacagtatcaagatacctctaaatataatgtcaggcatttgatgcctcagtaa

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