Arcanobacterium canis: P7079_05950
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Entry
P7079_05950 CDS
T09058
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acas
Arcanobacterium canis
Pathway
acas03030
DNA replication
acas03410
Base excision repair
acas03420
Nucleotide excision repair
acas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P7079_05950 (ligA)
03410 Base excision repair
P7079_05950 (ligA)
03420 Nucleotide excision repair
P7079_05950 (ligA)
03430 Mismatch repair
P7079_05950 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acas03032
]
P7079_05950 (ligA)
03400 DNA repair and recombination proteins [BR:
acas03400
]
P7079_05950 (ligA)
Enzymes [BR:
acas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P7079_05950 (ligA)
DNA replication proteins [BR:
acas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P7079_05950 (ligA)
DNA repair and recombination proteins [BR:
acas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P7079_05950 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P7079_05950 (ligA)
MMR (mismatch excision repair)
DNA ligase
P7079_05950 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P7079_05950 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
WFM84224
UniProt:
A0ABY8G2G7
LinkDB
All DBs
Position
complement(1311922..1314435)
Genome browser
AA seq
837 aa
AA seq
DB search
MKYADAKARWEELAPQVKRAQDAYHSTGEPVMVDATYDSLIHEMRALEDQFPQLWSPSSP
TMRIGARVARGGLAELRHREQMYSLQDVFSREELRQWYESINAELPAGSRFTAEIKIDGL
ALNLTYRDGVLETAATRGDGITGEDVTRNAQAISAIPHRLSGTDHPHLVEIRGEVYFPVR
AFEQYNAQVTTRNEEITRRNNAIKEKNAEIRKENARRRRQDGERAVLQPTLRMEQPLKEF
VNPRNAASGTLRQEDTTSFALRSLSFIAHGIGYLEGADATLNQQLATQEGVYSAFASWGV
PVSDQTAMVSSIEEIEEYLDRYQNARDLLDHQFDGVVIKLEDRHVQDLLGFTTRVPRWAV
AYKFPPVEVQTRLLDIRVQVGRTGRVTPYAVMEPVWVDGSTVSQATLHNPAEVERKGVKI
GDIVILRKAGDIIPEVLGPIVAMRDGSERDFVMPTRCPACEGEIRASKEGDADLRCQNTR
SCPAQLSQRIVHIGSRGALDIEALGEETGLWLADPDRYRSDALIALATGHKVSFETDLGM
VTSLKLPLVKRQALGIVDEDGAIIDPESVISDSILESLNFPAPSVPVLETEAGLFDLTAD
CVKDVRIWQPVKKAGEETGDWRQVRAAWTKPVWLKANASRSQPELKKPSEPSRTTLKILE
EIEVSKSKELWRKLVALNIRHVGPVAAKALAAEFGSLDAILQAGNDAVSRVEGVGEVIAD
SFLSWFDEPWHVDIIERWRRAGVTFEDHTVVVEQLPQTLDGMVIVATGTFATFTRDSINE
TIEAHGGKATGSVSKKTSAVVVGEKAGSKATKAIELGIPTLTEEEFAMLLETGKLPQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgcagatgccaaggcccgatgggaagaactcgctccgcaggtgaagcgtgcg
caagatgcgtatcactcaacgggagagccagtcatggttgacgccacgtacgattctctc
attcatgagatgcgtgcccttgaagaccagttcccccaactgtggagtccatcgtctccc
acaatgcgtattggtgcgagggttgcgcgtggcgggttggcggaactgagacatcgtgag
cagatgtattcgcttcaagatgttttttctcgtgaagaattgcgtcaatggtacgaatcg
atcaatgccgaattaccagcgggttcgcgcttcactgcagagatcaagattgacggactt
gcgttgaacttgacctatcgcgatggtgttctcgaaacggcagcaacacgcggcgacggc
attactggcgaagacgtgacacgcaacgcgcaggcaatctcggcaatcccgcatcgcctt
tccggtactgaccacccacatcttgttgagatccggggtgaggtctacttcccggttcgt
gcgtttgagcagtacaacgcacaggtcaccacgcgcaatgaggagattacgcggcgaaat
aacgcgatcaaagaaaaaaatgccgaaattcgtaaggaaaatgcgcgccgtcgtcgtcag
gatggtgaacgcgctgtgttgcaaccaactttgcgtatggagcaaccgctcaaagaattc
gtcaacccacgaaacgcggcgtcgggcacactgcgtcaagaggacaccacgtcttttgca
ctgagatcactgtcatttattgctcacgggattggctacttggaaggtgcagatgccaca
ctgaaccaacaacttgcgacccaagaaggtgtctatagtgccttcgcatcctggggcgtt
cccgtttcagatcagacagcgatggtgtcatcgatcgaagagatcgaagagtatcttgat
cgatatcagaatgctcgcgatttgctcgatcaccagtttgatggtgtcgtcatcaaactt
gaagatcgccacgtgcaggatctgcttggttttactactcgcgtgccgcgctgggcagta
gcatataagtttcctcccgttgaggtgcagactcgcctcctcgatatccgagtccaagtc
gggcgtaccgggcgcgtgactccatacgctgtgatggaaccggtgtgggtggatggctca
accgtttcgcaagcgactctgcacaaccctgctgaggttgaacgtaaaggtgtcaaaatt
ggagacatcgttattttgcgtaaagctggtgacattatcccggaggttcttggtccgatt
gtggcgatgcgtgatggctccgaacgcgattttgtgatgccgacacgttgccctgcatgt
gagggagagatacgcgcttcgaaagaaggagatgctgaccttcggtgtcaaaacactcgg
tcatgtcctgctcagctcagtcaacgtatcgtccatattggttcacgcggggcactcgat
attgaggcgttaggtgaagaaaccggattgtggctagcagacccagatcgttatcgttca
gatgcactcatcgccttagcgacagggcacaaagtctcctttgaaacagatttagggatg
gtgaccagtctcaaattgccgttggtgaagcggcaggcattgggaattgtggatgaggac
ggcgcaattattgatccagaatcagttatcagtgactcgattttggaatcactaaatttt
ccagctccttctgttccagtgctggaaacggaagccggacttttcgatctcactgctgat
tgtgttaaggacgtgagaatctggcaaccagtgaaaaaagctggggaagaaacaggggat
tggcgtcaagttcgcgctgcatggactaagccggtctggctcaaagccaatgcctcgcgt
tctcaaccagagttgaaaaagccaagtgagccaagccggacaacactcaaaattcttgag
gagattgaggtatccaagagcaaagaactgtggcgtaagctcgtcgcgctcaatatccgc
catgttggcccggtcgcagcgaaagcactcgctgcggaattcggatcgctcgatgctatt
ctccaggcaggaaatgacgcagtatcccgtgtggaaggcgttggagaagtcatcgctgac
tcgtttttatcctggtttgatgagccatggcacgttgacattattgaacgttggcggcgc
gcaggagtgactttcgaagatcacactgttgttgtcgaacagctcccgcaaactctcgat
ggcatggttattgtggcaacaggaacatttgcgacgtttactcgcgattcgattaacgag
accattgaagctcatggaggaaaagcaaccggctcggtatcgaaaaagaccagcgccgtc
gtcgttggagaaaaagctggctcgaaggcaacgaaagcaattgaactcggaattcccacc
ctcactgaggaagagttcgccatgctacttgaaacggggaaattgccccaatga
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