Aquarana catesbeiana (American bullfrog): 141107476
Help
Entry
141107476 CDS
T11018
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04145
Phagosome
acat04514
Cell adhesion molecule (CAM) interaction
acat04672
Intestinal immune network for IgA production
acat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
141107476
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141107476
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
141107476
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141107476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acat04147
]
141107476
Exosome [BR:
acat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141107476
Exosomal proteins of epithelial cells
141107476
Exosomal proteins of breast milk
141107476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
ig
Ig_3
C2-set_2
Ig_2
DUF3188
Fiji_64_capsid
CdpA_N
Motif
Other DBs
NCBI-GeneID:
141107476
NCBI-ProteinID:
XP_073454340
LinkDB
All DBs
Position
LG09:complement(32109373..32152943)
Genome browser
AA seq
268 aa
AA seq
DB search
MKTALIFFTALQFVLLLHIGIIQGEYTVESADYVLNEKFECHYMNGTQKVRYLNRLFYNQ
EEFVYFDSDKGYFIPKTEFGRPDAEQYNKDKDFIEQRKAAVQTFCIHNYDIIHSVTADRR
VKPMTKISLIHEDPHSEHHMLACNVNRFYPSEIEVKWYRNGEEETAQVQSTDIFQNGDWT
FQILVMLETEIEKGDTFTCEVLHSSLETPARVDWHPQESDSGKKKVVTGIVGFVLGTMLI
IAGVVVYMRGRKAQMLFRGPQTEHFIHT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagccttaattttcttcactgctttacaatttgtattacttctgcacattggc
atcatccaaggagaatatacagtagaatctgcagattatgttttgaatgaaaagtttgaa
tgtcactatatgaacggcactcagaaggtgagatatctgaacagactattctacaatcag
gaggagttcgtatactttgacagtgataagggatatttcataccgaagacggagttcggg
agacccgatgctgagcaatacaacaaggataaggatttcatagaacaaagaaaggccgcg
gtgcagacattctgtatacacaactatgatatcatacacagcgtcactgctgaccggaga
gttaagccaatgaccaagatatccctaatacatgaagatccccattcagagcatcatatg
ctggcgtgtaatgtgaatcgtttctacccatctgagatagaagtaaaatggtaccggaat
ggtgaggaggaaactgctcaggttcagtctacagacatcttccaaaatggagattggacc
ttccagatcctggtgatgctggagacagagatagaaaaaggagataccttcacctgtgag
gtccttcacagcagcctggagacaccagccagagtagattggcacccccaggaatcagat
tcaggaaaaaagaaggtggtaactggaattgtgggatttgtgctgggaaccatgcttatc
attgccggtgtggttgtctatatgagaggtcgcaaagctcaaatgttatttcgtggacca
cagactgaacatttcatacacacataa
DBGET
integrated database retrieval system
