Aquarana catesbeiana (American bullfrog): 141107613
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Entry
141107613 CDS
T11018
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04010
MAPK signaling pathway
acat04060
Cytokine-cytokine receptor interaction
acat04150
mTOR signaling pathway
acat04210
Apoptosis
acat04217
Necroptosis
acat04350
TGF-beta signaling pathway
acat04620
Toll-like receptor signaling pathway
acat04621
NOD-like receptor signaling pathway
acat04622
RIG-I-like receptor signaling pathway
acat04625
C-type lectin receptor signaling pathway
acat04920
Adipocytokine signaling pathway
acat05132
Salmonella infection
acat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141107613
04350 TGF-beta signaling pathway
141107613
04150 mTOR signaling pathway
141107613
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
141107613
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
141107613
04217 Necroptosis
141107613
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
141107613
04621 NOD-like receptor signaling pathway
141107613
04622 RIG-I-like receptor signaling pathway
141107613
04625 C-type lectin receptor signaling pathway
141107613
09152 Endocrine system
04920 Adipocytokine signaling pathway
141107613
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141107613
09171 Infectious disease: bacterial
05132 Salmonella infection
141107613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
acat04052
]
141107613
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141107613
Cytokines and neuropeptides [BR:
acat04052
]
Cytokines
Tumor necrosis fators
141107613
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Cytokines
141107613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
141107613
NCBI-ProteinID:
XP_073454568
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All DBs
Position
LG09:complement(50084946..50090392)
Genome browser
AA seq
228 aa
AA seq
DB search
MEGTLTQVQSEVPLLQPPAAPRSNFSCFHWLSVCSFVLLLVATTIFALLHFQIIPTPGHQ
DEFQSPEVFHIQTFLGSAPHAQAMTGERLAAHLTGKLQDGNIIWVSTPMNTFKTSSVILE
ENSLKIPQDGLYFVYTQVVYTGKDCLTMKATELTHTVNRKGEYPKVTPLLTSTKTACEVK
SPSIWHQPIYQGGIFQLDEGDILSTETSHIPLLSLNRSGQVYFGVLAL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaagggactttgacccaagtacaatccgaggtgcctcttctgcagccacccgcagca
cccagaagcaacttctcatgcttccactggctcagcgtctgctcctttgtcctcttactg
gtggccaccactatattcgctctgctccacttccagatcatcccgacgcctggtcatcag
gatgagttccagtctccagaagtatttcatatccagacattcttaggttcagcaccccat
gcccaggccatgaccggagaaagactggctgctcacttaacaggaaaactccaggatggc
aacataatatgggtatccactcccatgaacaccttcaaaacctccagtgtaatacttgag
gaaaactctctgaagatcccacaagatggcctctacttcgtgtatacccaggtcgtctac
actggcaaagattgcttgacgatgaaagccacagagctgacccacacagtcaacagaaag
ggcgagtacccaaaagtcacgcctcttctcacctccaccaaaacagcgtgtgaggtgaaa
tcacccagtatctggcatcagcccatctaccaaggaggtatattccaacttgatgagggg
gacattctttcaactgaaacatcacacattcctcttcttagcctaaataggtcaggacaa
gtttattttggtgtccttgctctataa
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