Aquarana catesbeiana (American bullfrog): 141111950
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Entry
141111950 CDS
T11018
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04010
MAPK signaling pathway
acat04120
Ubiquitin mediated proteolysis
acat04140
Autophagy - animal
acat04144
Endocytosis
acat04620
Toll-like receptor signaling pathway
acat04621
NOD-like receptor signaling pathway
acat04622
RIG-I-like receptor signaling pathway
acat05132
Salmonella infection
acat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141111950 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141111950 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141111950 (TRAF6)
04140 Autophagy - animal
141111950 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
141111950 (TRAF6)
04621 NOD-like receptor signaling pathway
141111950 (TRAF6)
04622 RIG-I-like receptor signaling pathway
141111950 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141111950 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
141111950 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141111950 (TRAF6)
04121 Ubiquitin system [BR:
acat04121
]
141111950 (TRAF6)
Enzymes [BR:
acat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141111950 (TRAF6)
Membrane trafficking [BR:
acat04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
141111950 (TRAF6)
Ubiquitin system [BR:
acat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
141111950 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
TRAF3_RING
zf-C3HC4_3
TRAF6_Z2
Sina_ZnF
zf-TRAF_2
zf-RING_5
DUF4455
RING_XB3-XBAT31
U-box
SlyX
zf-RING_11
Med21
zf-RAG1
zf-RING_6
ATG16
Seryl_tRNA_N
CENP-F_leu_zip
DUF16
Motif
Other DBs
NCBI-GeneID:
141111950
NCBI-ProteinID:
XP_073460286
LinkDB
All DBs
Position
LG11:39288441..39340227
Genome browser
AA seq
617 aa
AA seq
DB search
MALPERGAEVSWEFPVTCGESQLCELEENPEVGWRVKVSGVCGGSEFDGGGAPSCPTTMS
LMNSRTSFEAADSDDACCGAMAACCMNTKDDITSPSVETPSANPSSLVMEETQGYDVDFD
PPLESKYECPICLMALREPLQTPCGHRFCKACIIKSIRDAGPKCPVDNDLLLEHQLFPDN
FAKREILSLMVRCPSQDCSARMELRNVEHHQAVCEFASMECLQCQQFFQRSQMQQHMVVC
PRREVSCENCLVSMPYEEKMVHEQKCPLAYVTCEYCETSGLVRHQMACHYSMDCIKAPIP
CIYSQFGCTEKMQRDDLAQHQQEFTQAHMRMMAQQLISFSPSLSSTPHMSSMQLDPSQFE
PGPPSIYTMPSASRLISSQRDGNQEQQQLKETVEQLEARLVKQDHQIRELMAKMETQTSL
VTDLKQTIRTLEDKLVEVEAQQYNGVFVWKIHHFSTHLKNQEEEKPVVIHSPGFYTGKPG
YKLCLRLHLQLPSAPRCANYISLFVHTMQGEYDSLLHWPFQGTIRLSILDQSEGSNLQDQ
EEVMDTKPELLAFQRPTMPRNPKGFGYVTFMHLQALKQRMYVKNDTLLVRCVVTTHGDLN
SPRREGFQPRNTDGTTM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttccggagcgcggagccgaggtgtcatgggagtttcctgtcacatgcggcgaa
agccaactctgcgaactagaggagaacccggaagttggctggagagtgaaagtgagcggg
gtttgtggaggatcggagttcgatggtggcggggctcccagctgcccgactactatgagt
ctaatgaattccaggaccagcttcgaggcggccgactcggacgacgcctgctgcggagct
atggcagcttgctgcatgaacaccaaggatgacatcaccagcccctccgtggaaactccc
agcgcaaacccttccagcctggtcatggaggagactcaaggctacgacgtggactttgac
cccccactggagagcaaatacgagtgccccatctgtctcatggcactgcgggagccgctg
cagaccccctgtgggcaccgcttctgtaaggcctgcatcataaagtctataagagacgcc
gggccaaagtgtcctgtggataacgatcttctcttagagcatcagctgttcccggataat
tttgccaaaagagaaatcctttcactgatggtgagatgtcccagccaagattgctcggcc
aggatggagctgaggaacgtggagcatcaccaggcagtctgtgaatttgccagcatggaa
tgcctacaatgccaacagtttttccagagaagccaaatgcagcaacatatggtggtgtgt
ccgaggcgagaagtgtcctgtgaaaactgccttgtgtctatgccctatgaggagaagatg
gttcatgaacagaagtgccctttggcctacgtaacttgtgaatattgtgagaccagcggc
cttgtgcgacatcagatggcctgtcactatagcatggactgtataaaggcccctattcca
tgtatctacagccagtttggatgtacagaaaagatgcagagggatgatctggctcagcac
cagcaggagtttacacaggctcacatgcggatgatggcacaacaacttataagcttcagc
ccatccctctcctcgacccctcacatgtccagcatgcagcttgatcccagccagttcgaa
cctgggcccccttctatatacacaatgccctctgcctctcgtctgatctcttcacaacgt
gatggaaatcaagagcagcagcagttaaaggagaccgttgagcaattggaggcccgccta
gtgaagcaagaccaccagatccgagagctaatggccaaaatggaaactcagacttcctta
gtaaccgatctaaagcaaaccatccgtaccttggaggacaagcttgtggaggtggaggct
cagcagtacaatggtgtctttgtgtggaaaatccatcattttagtacccacctaaaaaac
caggaggaggagaaaccagtagtcattcacagtccagggttttacactggaaagccaggt
tacaagctttgcctgcgccttcacctgcagctacctagtgccccacgctgtgccaactat
atctccctctttgtacacacaatgcaaggagagtacgacagtctcctccactggcccttt
cagggaaccatccgcctgtctatcctggaccaatcagaaggatccaatttacaagatcag
gaggaggtaatggacaccaaaccggagttgctggcctttcagaggcccaccatgccccga
aaccccaaaggctttggttacgtcacatttatgcaccttcaggcactcaagcagcggatg
tacgttaaaaacgacacacttctggtgcgctgcgtcgtaactacacatggggacctcaac
agtccgcgccgagaaggattccagccacggaacactgatggcacaacaatgtag
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