Aquarana catesbeiana (American bullfrog): 141114184
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Entry
141114184 CDS
T11018
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141114184 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141114184 (EFTUD2)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141114184 (EFTUD2)
Complex C
U5 SnRNP specific factors
141114184 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141114184
NCBI-ProteinID:
XP_073463820
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All DBs
Position
LG12:complement(48518288..48575382)
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AA seq
974 aa
AA seq
DB search
MDTDPYDEFGNYIGPELDSDDDDDDDDMGRDDRDIDVADDEDDDDYMADPDEDRGGMEVV
LHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSMMEQGLPATVYSMEF
LADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEVRKRHDQDLCYTDILFTEQERG
VGMKSTPVTVVLPDTKEKSYLFNIMDTPGHVNFSDEVTAGFRISDGIVLFIDAAEGVMLN
TERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSIYSTDEHL
ILSPLLGNVCFASSQYSICFTLGSFAKIYADTFGDINHVEFSKRLWGDIYFNPKTRKFTK
KAPTSSSQRSFVEFVLEPLYKILAQVVGDVDTSLPQTLEELGIHLTKEELKLNIRPLLRL
VCNRFFGEFTGFVDMCVQHIPSPKSGARAKIEHTYTGGIDCDLGEEMSQCDSDGPLMCHT
TKMYSTDDGVQFHAFGRVLSGTIHAGQAVKVLGENYTLEDEEDSQICTVGRLWVSVARYQ
IEVNRVPAGNWILIEGADQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPS
ELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNRKKLGEFF
QTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLSSVKDSIVQGFQWGTREGP
LCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQA
PADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSL
SVFHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPML
LELAKQDVVLNYPM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggacactgacccttatgatgagtttgggaactacattggtcctgagctggactcggat
gatgatgacgatgatgacgatatgggcagagatgacagagatattgatgtggcagatgat
gaggatgatgatgattatatggcagatcctgatgaggatcggggtggtatggaagttgtt
ctccatgaggacaagaagtattaccccactgcagaggaagtgtatggcccagaggtggag
actattgtgcaggaggaggatacccaacccctgacagagcccattattaaaccagtgaag
acaaagaagttctcaatgatggagcaagggcttccagccactgtatattccatggagttt
cttgctgatctaatggataactctgagcttatcaggaatgtcactctatgtggtcacctc
caccatggaaagacctgctttgtagactgtttgatagagcaaactcatccagaggtccgg
aagcgccatgatcaggatctctgctatactgacattctgttcacagagcaggagagagga
gtcggcatgaagagtacaccagtgacagtcgttcttccagacaccaaagagaaatcttac
ctctttaatattatggacacgcctggacatgtgaacttctctgatgaggtgacagctggg
ttccgcatatcagatgggattgtcctgttcatcgatgctgctgaaggggtcatgctgaac
acagagcgtctgataaagcatgccgtgcaggaacgcttagctgtcactgtttgcattaac
aagattgatcgtttgattctggaactaaagcttccccctactgatgcctattataagcta
aggcacattgtggatgaagttaatgggttgttgagcatttattccacagacgagcatctc
attctgtcccctctcttgggcaatgtctgctttgcaagctcacagtacagcatatgcttc
accctgggctcttttgccaagatctatgcggatacttttggtgatatcaaccacgtggag
ttttctaaacgactgtggggcgatatctacttcaatccaaagacacgaaaatttaccaag
aaagctccaacaagcagctcgcaacgcagttttgtggagtttgtgcttgaacccctttac
aagatcctggcccaggtggtgggtgatgtagacacatctctgcctcagaccctggaggag
ctggggatccacctcaccaaggaggagttaaaactgaacatccgacctctactgaggctt
gtctgtaaccgcttttttggggagtttacaggttttgtggatatgtgtgtccagcacatc
ccttcacctaagagtggtgcgagagccaagattgagcacacatacactggaggcatcgat
tgtgacctaggagaagaaatgagccagtgtgattcagatggacctctaatgtgtcacacc
accaagatgtacagtacagatgacggggtgcagttccatgcctttggccgggtgttgagt
ggcaccattcatgccgggcaggcagtgaaagtgttgggtgagaattacactttagaagat
gaagaggactcccagatctgcactgtgggaagattgtgggtgtccgtggccaggtatcaa
attgaagtgaacagagtgccagctggaaactggattcttattgagggagcggaccagcca
attgtgaagactgccacaatcactgagccacggggcaatgaggaggctcagattttccgg
ccattaaagttcaataccacgtcagtcatcaagattgctgtggagcccgtgaacccatca
gaactgccaaagatgttagatggattaagaaaagttaacaagagttacccttcgctcacc
accaaggtggaggagtctggggagcacgtcattctgggtaccggagagctgtacttggac
tgtgtaatgcacgacctccgcaagatgtattcagagattgacattaaggtggctgatcct
gtggtgacattttgtgagactgttgtggaaacctcatcactaaagtgctttgctgagaca
cctaataagaagaataagatcacaatgattgcagaaccactggagaaagggctggctgaa
gacattgaaaatgaagttgtgcagatctcttggaacaggaagaaactaggagaatttttc
cagacaaaatatgattgggatttgctggctgcccgttctatctgggcatttggaccagac
actactggacccaacattttggtagatgatactctgccatctgaggtggacaaagctctg
ctgagttcagtaaaggacagtatagttcaaggattccagtggggtacgagagaggggcct
ctctgtgatgaactgatcaggaatgtgaaattcaagatcttggatgctgtgattgcacag
gagcctttgcaccgcggtgggggacagatcattcctacagcccgcagagtggtatactct
gccttccttatggccacaccccgtctcatggagccgtattactttgtggaagtgcaagct
ccagcagactgtgtctctgctgtgtatactgtgctggccaggaggagaggccacgtcaca
caggatgcccctatacctggatccccactctacaccattaaagcattcatccctgctata
gattcttttggttttgagacagatctgcgcacacatactcagggacaggccttctccctg
tctgttttccatcactggcagattgtgccaggtgaccccttggacaaaagcatcatcatc
cgacctctggagccccagccagcacctcacctcgccagggagttcatgattaagacaagg
cgtagaaagggcctgagtgaagacgtaagcatcagcaagtttttcgacgatcctatgttg
ttggagttggccaaacaggatgtggtcctgaattatcccatgtga
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