Aquarana catesbeiana (American bullfrog): 141129224
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Entry
141129224 CDS
T11018
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04530
Tight junction
acat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141129224 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141129224 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acat04990
]
141129224 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
acat04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
141129224 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
PDZ_2
SOS1_NGEF_PH
PH_11
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
141129224
NCBI-ProteinID:
XP_073473207
LinkDB
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Position
LG02:complement(749813285..750421001)
Genome browser
AA seq
1591 aa
AA seq
DB search
MGNAESQNVEQALYGKDHPSLGRKHTSRSLRISNKASRRTRHASSGKPVHRNSEVSNRSS
STPSIPQSLAENGMEPYTQDANLDDYDSRGWVDMGMRPVSYHTDSSVTPSLNSSTVLTAA
SMQSMQDSEESRLYGNESAYFTDGNSRSQLYMTDGPNLLDAASFKKKRSKSADIWREDSL
EFSLSDLSQEHLTSTEEILCSTEEKDCDETIRNDPGDSSQQLDASQRANSLSDLYPQKSP
HSVNGVPRNKFMIYCRNLVSHSPESLKYKQATPPADEQPSYSNYNTLPCRKSHCLSEGAT
NFKLSHSNSMHGRRAKTTQDVNTGGEGSEFTDSGIEATTTDTDFMSRRSNATTSSYSPTA
SRAFIGSDSGSSSGDALLQGVYENFRRELEMSSASRENLEEANSALSDEQSSGTLSSPGQ
SDILRTAAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKHYWVSLKGCTLFFYESDGR
SGIDNSSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTNSQTELENWITAI
HSACATTVARQHHKEDTVKLLKSEIKKLEQKIDMDEKMKKMGEMQLSSVTDNKKKKTILD
QIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSF
HALVAARTGESGVRRRTQAMSRSASKRRSRFSSIWGLDTTSKKKQGRPSLNQVFNDGSDS
VKKSLEGIFDDTISEDKKEKEVPLTSVHSHNADADIWVHEYLTPSWVCLPNDQPVLIAIH
PEDTAKDALAFICKTHQLDYNAHYLCLKFLCNNQQQHYVPRPEEEIYELLYKEISICPKV
IRYIQLEKTDPSENYGISLCSVEEEGRPHLYVQNVKESGLAFKRGLKIGDEVMEINSAAA
RDLNSGMLKYVLAKPLLCLTVRTYPELEENRALMGAPPRRSESDCNDYNLFASSRGCSED
ESVIETTPEEIEVQLEVTDEADATDSSSEHVAAFCRSLNEMNSPDSCLSPSEFTGTPLGT
MRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLVEM
VEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASHTK
VPKVLVKAKTDQHFKAFLDAQNPKQQHSSTLESYLIKPIQRILKYPLLLKELYSLTDAES
EEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIAEQTGEIKEVADLSMGDLLLHS
TVVWLNPPTSLGKWKKDPELATFVFKTAVVLVYKDSSKQKKKLGGSHRASMFEDRDPFRF
RHMVPTEALQLRALTTSDAETNSVCEIVHVKSESEGRPERAFHLCSSSPAEKKEFLRAVH
SILRDKHRRQLLKTESLPNSQQYVPFGGKRLCALKGARPAMNRAVSAPSRSLARRRRLVR
NRFTIDSDTVYSTSPDKEPDPEPEPKPPQQTNNSGDTDRWVEEQFDLAQYEEQDDVKETD
ILSSDDEYCESIKGGSMEKDLSDQLEATSLSNNSMDNIVQNTMSTHASRMTKFKKQTAFS
GMNGSIESTTEEVIWVKRDDFVPARKLNTEI
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcagaaagccaaaatgtagagcaagcgttgtatggtaaagaccaccccagc
cttgggcgtaagcacacatcccgctcacttcgaatttccaacaaagcatctcgccgcact
cgtcatgcatcatcgggaaagccggttcaccgaaattctgaggtcagcaataggtcaagc
agcactcccagcatcccacagtctctagcagaaaatggcatggagccatacactcaggat
gccaacctggatgactacgatagccgaggttgggtagatatgggcatgaggccggtttcc
tatcacaccgattcctctgttacaccaagtttgaacagcagcactgtccttacagcagcc
tccatgcagagcatgcaggactctgaagaaagtaggctatacgggaatgaatctgcctat
tttacagatgggaacagtcgctctcagctgtacatgacagacgggccaaatctcttggat
gctgccagttttaagaagaaacgttctaaatctgccgacatatggcgagaggacagctta
gaattctccctctcggacctgagccaagaacacttaaccagtactgaggaaattttatgt
tccaccgaagaaaaggattgcgatgaaaccattcgaaatgatcctggagactcctctcag
caactggacgcttcccaacgtgccaactccctcagcgacttgtacccacagaagagccca
cactccgtcaatggagtccccaggaataagttcatgatttactgtagaaatttggtttca
cattctcctgagtctttaaaatataaacaggcaactcctccagctgatgagcaaccatca
tacagcaactataataccctgccttgccggaagtcccattgtctctctgaaggagccact
aactttaagctcagccacagtaatagcatgcatggacgcagagctaaaacaactcaggat
gtcaatacaggtggagagggcagcgagtttacagacagtggtatcgaggccacaaccact
gacaccgacttcatgtccagacgctcaaatgccaccacatccagctactcccccaccgcc
agccgggcctttatcgggagcgacagtggtagcagctccggagatgctctcctccaagga
gtttatgagaatttccggcgagaactggagatgagcagtgccagtagagaaaacttggag
gaagccaattcagctctaagtgatgaacaaagcagcggcactttaagctctcctgggcag
tccgacatcctccggactgcggcacaagggactgtgcgaaaagctggggcgctggccgtc
aaaaacttccttgtgcacaagaagaacaagaaggtggaacctgccacccgaaggaaatgg
aaacattactgggtctctttaaaagggtgtacactgtttttctacgagagtgatggtcga
tctggaattgacaacagcagtataccgaaacatgctgtgtgggtggagaacagcattgta
caagcagtcccagagcaccccaagaaggactttgtgttctgtctcagtaattcgcttggg
gatgctttcctcttccagaccaacagccagacagagctagagaactggatcacggccatc
cattccgcttgtgccaccaccgtagccaggcagcaccataaggaggatacggtcaaattg
ctgaagtcagaaataaaaaaactggagcagaagatagacatggacgagaagatgaagaaa
atgggagagatgcagctttcttctgtgacggacaacaaaaagaagaaaaccatcctcgat
cagatctttgtctgggagcagaacctcgagcagttccagatggatttgttccgctatcgc
tgctatcttgccagcctgcaggggggcgaactgccaaacccaaaacgcttactggctttt
gcaagccgacccactaaagttgccatgggccgcttgggaattttctctgtgtcctcgttt
catgccctggtggccgctcgtacaggagagtccggtgtgagaagacggacacaagccatg
tcacgatctgccagtaaaaggaggagccggttttcttctatctggggtcttgacacaact
tctaagaaaaaacaagggaggccaagccttaatcaggtgtttaatgatggttcagactct
gtcaagaaatcgttggaaggcatttttgatgatactatatcagaagacaagaaggaaaaa
gaggtgcctttgaccagcgtccactctcacaatgccgatgctgacatctgggtgcacgaa
tacctgacaccttcctgggtatgcttgccaaatgaccaaccagtcctaattgccatccat
ccagaggatacagcaaaggatgccttagcgttcatttgtaagactcatcagttggattac
aatgcccattatctctgcctgaaattcctctgtaacaaccaacagcagcattatgtacca
agacccgaggaagagatctatgaactgctctacaaagaaatctcaatctgccccaaagtc
atcagatatattcagctggagaagactgacccttcagaaaactatgggatctctctatgc
tctgtggaggaggaaggcagaccacatctgtatgtccaaaatgtgaaggagtctggcttg
gcattcaaaagaggtttgaaaataggagatgaagtgatggagattaattcagccgcagca
cgagatctcaactctgggatgctaaaatatgtcctggccaaaccgttactgtgccttact
gtccgtacctatcctgagttggaggagaaccgggctctgatgggggcaccgccacgccga
tctgagtctgattgtaatgattacaatctgtttgccagtagtcgaggttgcagtgaggat
gagagtgttattgagaccactccagaggagatcgaagtgcagctggaggtgacagacgag
gctgatgctacggacagtagctccgagcacgttgctgcattttgtcgcagcctcaatgag
atgaactcgccggactcctgcctgagcccctcggaattcacaggcaccccgctgggcacc
atgaggcaattaacggacgcggacaaactgcgcaaggtgatttgcgagctgctggagacg
gaacgcacctatgtcaaggatctaaattgcctaatggaaaggtaccttaaacctctgcag
aaagagacgtttctcacacaagacgagctggacgtgctattcggcaatctggtggagatg
gtggagtttcaggttgaatttctgaaaactttagaggatggggtcaggctggtaccagac
ctggaaaagctggagaaagtcgatcagtttaagaaagtcctgttttctctgggtggatct
ttcctatattacgccgatcgattcaagttgtacagtgccttctgcgccagtcacaccaag
gtcccgaaagttttagtgaaagctaaaacagaccagcatttcaaagcatttctagatgcc
cagaacccgaagcagcagcactcttcaaccctggagtcttacctgatcaaacccatccag
cgcattctcaagtacccactgcttctgaaagagctgtactcgttaacagacgcggagagt
gaagagcattaccacttggatgtggcaatcaaaaccatgaacaaagtggccagccacata
aacgagatgcagaagatccatgaagagtatggtgcggtgtttgaccagctcatagccgaa
cagaccggggaaatcaaagaggttgcagatttatcaatgggagacttattactgcacagt
acagttgtatggctgaaccctccgacatcacttggcaagtggaaaaaggatccggaactg
gcaacctttgtatttaagactgcagtcgtattggtgtacaaggacagctccaagcaaaag
aagaagcttggtggatcacacagagcctccatgtttgaagaccgcgatccattccgcttc
agacatatggttcctacagaagctctgcagctgcgagcgctcactacatcagatgctgaa
acaaactccgtctgtgaaattgttcatgtaaagtcggaatccgagggaagaccagaaagg
gcttttcatttgtgcagcagttctccagctgaaaagaaggagttcctgagagcagtgcat
tctatcctacgggacaagcacaggcggcaactgctgaaaactgaaagcttaccaaactcc
caacagtatgtcccatttggggggaagaggctgtgtgcactgaagggtgctcgccctgcc
atgaacagagcagtttctgctcccagtagatctcttgcccggagaagacgcctcgttagg
aaccgcttcaccatcgactcagatacagtttactcaacaagccctgacaaagagcctgac
cctgaacccgagcccaaaccacctcagcagactaacaacagcggtgacactgaccgctgg
gtggaggagcaattcgatctggcccaatacgaggagcaggacgacgtgaaggaaacagac
attctcagcagtgatgatgagtactgtgagtccatcaaaggtggctctatggagaaggat
ctaagcgaccagctcgaagccacttccctctccaacaattcaatggataacatcgtccaa
aacactatgagcactcacgcttcccgtatgaccaagtttaagaaacagactgccttttct
ggaatgaacggtagcatagagagcaccaccgaagaagttatatgggtaaaacgggatgac
tttgtaccagccaggaaactaaacacagaaatctga
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integrated database retrieval system
