Anaerocolumna cellulosilytica: acsn021_24660
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Entry
acsn021_24660 CDS
T06764
Symbol
ligA2
Name
(GenBank) DNA ligase 2
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
acel
Anaerocolumna cellulosilytica
Pathway
acel03030
DNA replication
acel03410
Base excision repair
acel03420
Nucleotide excision repair
acel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
acsn021_24660 (ligA2)
03410 Base excision repair
acsn021_24660 (ligA2)
03420 Nucleotide excision repair
acsn021_24660 (ligA2)
03430 Mismatch repair
acsn021_24660 (ligA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acel03032
]
acsn021_24660 (ligA2)
03400 DNA repair and recombination proteins [BR:
acel03400
]
acsn021_24660 (ligA2)
Enzymes [BR:
acel01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
acsn021_24660 (ligA2)
DNA replication proteins [BR:
acel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
acsn021_24660 (ligA2)
DNA repair and recombination proteins [BR:
acel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
acsn021_24660 (ligA2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
acsn021_24660 (ligA2)
MMR (mismatch excision repair)
DNA ligase
acsn021_24660 (ligA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
acsn021_24660 (ligA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Nlig-Ia
Lar_restr_allev
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
BCJ94897
UniProt:
A0A6S6R4C4
LinkDB
All DBs
Position
complement(3014730..3016691)
Genome browser
AA seq
653 aa
AA seq
DB search
MENKVNKMKELVGLLNEAGKAYYQENREIMSNYEYDSLYDQLVDLEKETGTVLSNSPTIH
VGYEILSELPKERHDEQMLSLDKTKDVLSLKEWLGSQKGVLSWKLDGLTIVLTYREGYLV
KAVTRGNGEYGEVITNNAKVFKNLPHKIQYRGELILRGEAVIKYSDFEKINAGIADVDSK
YKNPRNLCSGSVRQLNNEITAKRNIHFFAFQLVSVKGEDITFDNSRVVQLNWLKELGFEV
VESKIVTQETIEDVVQLFSDKVHENDFPSDGLVLILDDIDYGKSLGTTAKFPRDSIAFKW
MDEIRDTTLTEIEWSASRTGLINPIAVFEPVELEGTTVSRASLHNLSIMEALELGLGDTV
QVYKANMIIPQLADNLTRSGGIEIPKECPVCHQPTQIKQENDVKSLFCTNEECLAKRIKS
FTHFVSRDAMNMEGLSEATIEKFIAKGFLHQLADLFHLQNNKEEIVEMEGFGKKSYDNLI
ASIEKSRVTTPAKFLYSLGIQNIGLSNAKLICKEFKNNFDEMRKTESDRLLTIPGIGGVI
ADSFVEFFRKESNLIMIDNLLKEITFESQEIKTENSTLTDKTFVITGSLEKFENRNALKE
FIEAKGGKVTGSVTSKTDYLINNDNLSSSSKNKKAKELGIEIITEEEFINLSN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaagtgaataagatgaaagaattagtgggcttgttaaatgaagccgggaag
gcgtactaccaagaaaacagggagattatgagcaattatgagtatgattccttgtatgac
cagcttgtggatttggaaaaagaaacaggaacggtcttatctaatagtccgactattcat
gttggatatgaaatcttaagtgagcttccgaaagagcgtcatgacgagcaaatgctatcc
ctagataaaacaaaagacgtgttaagtttaaaggaatggcttggttcacaaaaaggagta
ttgtcctggaaactggatggtttaaccatagtacttacgtaccgtgaagggtatcttgtt
aaagccgttacaagaggaaacggagaatatggagaagttataactaataatgcaaaagta
tttaaaaatcttcctcataagattcaatataggggggaattaatactgcgaggtgaggca
gtaattaagtattctgattttgagaagattaatgctggtattgccgatgtagattccaag
tacaaaaacccaagaaatctatgtagtggcagtgtaagacaattaaacaatgaaataact
gcaaaaagaaatattcatttttttgcatttcaattggtaagtgtaaaaggggaagatatt
acttttgacaattccagagtggttcaattgaattggttaaaagaactgggctttgaagta
gttgagagcaaaattgtaacccaagaaactatagaagatgtagtgcagttgttttcagat
aaagtgcacgagaatgattttccttccgacggtcttgtgcttatattagatgatattgat
tatggaaaatcgctaggtacaacagctaaattcccaagagattccattgcatttaaatgg
atggatgaaattcgggacacaacccttactgaaatagaatggagtgcttccagaacgggt
ttgattaatcctattgcggtatttgagcctgtagaattggaaggaacaacagtaagccgt
gccagccttcataatttaagtatcatggaggcattagagctgggacttggcgatacggtg
caagtttataaggcaaatatgataatacctcagttagccgataacctgacaagaagcggc
ggaattgaaattcccaaggaatgtccggtctgtcatcaacctactcagattaagcaggaa
aatgatgtgaaatccttattttgcaccaatgaggaatgtctggcgaagaggataaaatct
tttactcattttgttagcagagatgcaatgaatatggaggggttatcagaagctaccata
gaaaagttcattgcaaaaggttttcttcatcagctggcagatttattccatcttcagaat
aacaaagaggaaatcgtagagatggagggttttggaaagaagtcctatgataatcttata
gcttctatagagaaatcaagggtaacaactccagctaaatttttatatagtctggggata
caaaatatcggattgtccaatgcgaaattaatctgtaaagagtttaagaataattttgat
gaaatgcgtaaaaccgaaagtgacagacttttaaccatcccaggtataggcggagttatt
gcagattcttttgtggagttttttcggaaagagagcaatctgattatgattgataatctg
ctgaaggaaataacttttgaaagtcaggaaatcaaaacagaaaattctactcttaccgat
aaaacttttgttattactggctcattagaaaagtttgaaaaccgaaatgctttaaaagag
tttattgaagctaaaggtggaaaagtaactggttctgttacttctaaaacagattactta
attaataacgacaatctatccagttcttctaaaaacaaaaaagccaaggaacttggaatt
gaaattataacagaagaggaatttataaatctatcaaattaa
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