Apis cerana (Asiatic honeybee): 107997249
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Entry
107997249 CDS
T07475
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
acer
Apis cerana (Asiatic honeybee)
Pathway
acer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
acer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107997249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acer03400
]
107997249
Enzymes [BR:
acer01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107997249
DNA repair and recombination proteins [BR:
acer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107997249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
DNA_ligase_IV
RNA_ligase
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107997249
NCBI-ProteinID:
XP_028522211
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
ISFFPILKLILPDLERRQEAYNLKQKSLADLYIRVFCLGKNSKDAKNLKQYKTPIVKKIA
GREKTKKDFAEKAFYILQNRLPLKNSDFTLERINLFLNNISLKNKADRPKDEIFKFLLGK
TNALEFKWITRIILRNLKLGITSKKILQVFHPNANSLFDVSSNLQYVCEKLYDPQLRYHC
DIQVFSHFKPMLLERCQIENIKKLFNEKEQYFVQCKYDGERSQMHMKDRKYKYFTRQGYD
ITNYSGFGETSSLGFMSNVFDRLLNQEVKSVILDGELMGWHKEKKLLGSKGMNYDVKKLS
ENSHYQPCFVAFDIIMYNDILVNNEPYEKRLKILKDIFKEEKGSLLLCKSIKVSNSEELC
NIFNESVKNKEEGIVVKKCDSKYKPNIRDGSGCYKIKAEYSEDLIQDIDLIILGGYYGDG
KFIDSIKSFLMGVASSSKTPGENPTEFLSVVSVSNGLSMNTLKELWKIFENKWQTERPMN
VIPPKIDPPELWIRPENSIILTVKATEMIRSSNYPMGYSLRFPRVTNIRIDKPWYNVCTT
NNLKSLIKDTWPIQKLTKRKVNYEDIDEDEVSETKISKTKKYYSRTKNEQTLIKPNIFVD
PPIQLTRLFDDKEICVINGNDELPKERIEEILLQHRAKVVQNPLKENYCVIIGNVKTIKA
NNIIQNNNICKKYDIVTLDWFKRVTKEENWSSLQDFLPWDLICSRESTRQRLAQYYDDYY
DHYTIDANEETLLRSFKKLEETEQNIKFDYTKMNKIDQELFDNKISPYSLFRGIIGYFND
PSDLSKFQFRFMAGTIKETIDDSVTNIFINNNYINTELQNLIGNKLQMLTIIKSEWIEEC
FKQNAIIPHSKYLIQ
NT seq
2570 nt
NT seq
+upstream
nt +downstream
nt
atatttcattctttcctatattaaaattaattttaccggaccttgaacgaagacaggagg
catataatttaaaacaaaagtctctcgctgatctttatattcgtgtattttgtttaggaa
aaaatagtaaggatgcaaaaaatcttaaacaatacaaaactccaattgtaaaaaaaatcg
caggacgcgaaaaaactaaaaaagattttgcggaaaaagctttttatattttgcaaaatc
gtttaccactcaaaaattctgactttacattagaacgaattaatttatttttaaataata
tatcgttaaaaaataaagctgatcgaccaaaggatgaaatatttaaatttttattaggaa
aaacgaatgcattagaattcaaatggataacacgaattatcctaagaaatttaaaacttg
gtattacgtcgaaaaaaatattgcaagtttttcatccaaatgcaaattcattatttgatg
tatcatctaatttgcaatatgtttgtgaaaaattatatgatccacaattaagatatcatt
gtgacattcaagttttttctcattttaaacctatgttattagaacgatgtcagattgaga
atataaagaaactttttaatgaaaaagaacaatattttgtacaatgcaaatatgatggtg
aacgatctcaaatgcatatgaaagatagaaagtataaatattttacacgacaaggatatg
atattacgaattattctggttttggggaaactagttctttaggttttatgagtaatgtat
ttgatcgattattaaatcaagaagtaaaatcagtaattttagatggtgaattaatgggtt
ggcataaagaaaagaaattattaggttcaaaaggaatgaattatgatgttaaaaaattat
cagaaaatagtcattatcagccatgttttgttgcatttgatattattatgtataatgata
tattagttaataatgaaccttatgaaaaaagacttaaaattttaaaagatatatttaaag
aagaaaaaggttctcttttattatgtaaatctattaaagtttccaatagtgaggaattat
gtaacatatttaatgaaagtgttaaaaataaagaagaaggaattgtagtaaaaaaatgtg
atagcaaatataaaccaaatataagagatggttctggatgctataaaataaaagctgagt
attctgaagatttgatacaagatatagatttaataatacttggtggttattatggtgatg
gaaaatttatagattcaataaaaagctttttaatgggagtagcttcatcatcaaaaactc
ctggtgaaaatcctacagaatttttatctgtagtatcagttagcaatggtttatctatga
atacattgaaagaactctggaaaatatttgaaaataagtggcaaactgaacgccctatga
atgtaattcctcccaagatcgatccgccagaattatggattcgtcctgaaaattctatta
ttttaactgtaaaagcaacagaaatgatacgaagttctaattatccaatgggatatagtt
tacgatttcctagagttacaaatattagaattgataaaccatggtataatgtttgtacaa
ctaataatttgaaatcattaattaaggatacgtggccaattcaaaaattgacaaaaagaa
aagtaaattatgaagacatagatgaagatgaagtatctgaaaccaaaatatctaaaacaa
aaaaatattattcaagaacaaagaatgaacaaacattgataaaaccaaatatttttgttg
atccaccgattcaacttacccgactttttgatgataaagaaatttgtgtaataaatggca
atgatgaattgcctaaagaacggattgaagaaattcttttgcaacatagagcaaaggttg
tacaaaatcctttaaaagaaaattactgtgttataattggtaatgttaaaacgataaaag
caaataatattatacaaaataataatatatgtaaaaaatacgatatagtaacattagatt
ggttcaaacgggttaccaaagaagaaaactggtcatcattgcaagatttcttaccatggg
atttgatatgcagccgcgaatcaacaagacaacgattagcacaatattatgatgattatt
acgatcattatactatagatgctaatgaagagactttacttcgttcgtttaaaaaattag
aagaaacggagcaaaatattaaatttgattatacaaaaatgaataaaatagatcaagaat
tatttgataataaaatatctccttattctctatttcgtggtattataggatatttcaatg
atccatcagatttatcaaaatttcaatttcgatttatggctggaactattaaagaaacta
tcgatgattctgtaacaaatatctttattaacaataattatatcaatactgaacttcaaa
atttaattggtaataaattacaaatgttaacaattattaaaagtgagtggattgaagaat
gttttaaacaaaatgcaattattcctcactctaagtatctgattcaataa
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