Achromobacter sp. ES-001: KYT87_06960
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Entry
KYT87_06960 CDS
T10529
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
acha Achromobacter sp. ES-001
Pathway
acha00010
Glycolysis / Gluconeogenesis
acha00020
Citrate cycle (TCA cycle)
acha00620
Pyruvate metabolism
acha00785
Lipoic acid metabolism
acha01100
Metabolic pathways
acha01110
Biosynthesis of secondary metabolites
acha01120
Microbial metabolism in diverse environments
acha01200
Carbon metabolism
acha01210
2-Oxocarboxylic acid metabolism
Module
acha_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
acha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KYT87_06960 (mdeB)
00020 Citrate cycle (TCA cycle)
KYT87_06960 (mdeB)
00620 Pyruvate metabolism
KYT87_06960 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KYT87_06960 (mdeB)
Enzymes [BR:
acha01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
KYT87_06960 (mdeB)
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
QYJ22970
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Position
complement(1557200..1559887)
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AA seq
895 aa
AA seq
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MRDASHPAPGHDHPTDADPAETAEWRDALQSLVDADGASRAGYVLDSLLGHAASLGLRAN
SQTRTAYLNTIPADQEPPFPGNLAVEERIARINRWNALAMVVRANQAHGELGGHIASYAS
AADLFEVGFNHFFRAQTADGPGDLVYMQPHSAPGVYARAFLEGFLGEDDLAHFRQEITAT
ARGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLVPAGDRKVWGI
FGDGEMDEPESIAALTLAAREKLDNLVFVVNCNLQRLDGPVRGNGRIIDELETLYAGAGW
NVIKLVWGSDWDALLRRDTNGALARAFANTVDGQFQTFAANDGAFNRAHFFNQNPELAAL
VADWTDEAIDRLHRGGHDMVKIHAAYHRAAQHRGQPTVILAQTKKGFGMGAAGQGKMTTH
QQKKLDDEALLAFRDRFALPISDADCLALKFYRPAEDSAELRHLQARRAALGGHIPRRRT
ESPRLAPPAVEQWARFALAADGKEMSSTMAIVRMLTGLLKDATVGSRIVPIVADEARTFG
MANLFRQIGIYSAQGQLYEPEDIGSVLYYREARDGQILEEGITEAGAISSWTAAGTSYSV
NGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGSSHI
MAAAVPNCRAYDPAYAFEVAVIVEHGMRRMLDEQHDEFFYLTVTNENLAQPDMPTDPAVR
VGILRGMYRLRAARVQAQVRLLGAGPMLREADMAADRLHADYGVDAEVWSVTSFSELARD
GRQAERARVLGLEAADDADWVRTCLGGSDAPVIAATDYVRAVPEQIRAWVPAPYRTLGTD
GFGRSDTRAQLRDFFEVSADWIVLYALDSLGRQEDADALRQRLNARTRQTPPWEL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgcaagccaccccgccccgggacatgaccaccccaccgatgccgacccggct
gaaaccgccgaatggcgcgatgccctgcaatcactggtcgacgcggacggagcaagccgc
gcgggctacgtgctggacagcctgctcgggcatgccgcgtccctgggcctgcgcgccaac
agccagacgcgcaccgcctacctgaacacgataccggccgaccaggaaccgccttttccc
ggcaacctggccgttgaagaacgcatcgcccgcatcaaccgctggaacgcgctggccatg
gtcgtgcgtgccaaccaggcgcacggggaacttggcggccacattgccagctatgcatcg
gccgccgacttgttcgaagtcggcttcaaccacttcttccgtgcgcaaaccgccgacggc
ccgggtgacctggtctacatgcagccgcactccgcgcccggcgtgtacgcccgcgccttc
cttgaaggctttctgggcgaagacgacctggcacattttcgacaggaaatcaccgccacc
gcgcgcggcctgcgcgggttgtcgtcctacccgcacccctggctgatgccggacttctgg
cagttcccgacagggtccatgggcatcggacccatcaacgccatttaccaggcgcgcttc
atgcgctacctggaacaccgctcgctggtgcccgccggcgaccgcaaggtctggggcatt
ttcggcgacggcgaaatggacgaacccgagtccattgccgcgctgacgctcgccgcgcgc
gaaaagctggacaacctggtgttcgtcgtcaactgcaacctgcaacggctggacggcccg
gtgcgcggcaacggccgcatcatcgacgagcttgaaaccctgtacgccggcgccggctgg
aacgtcatcaagctggtgtggggcagcgactgggacgccctgcttcgccgcgacaccaac
ggcgcgctggcccgagccttcgccaacacggtggacgggcaattccagacctttgccgcc
aatgacggggccttcaaccgcgcccacttcttcaaccagaacccggaactggcggcgctg
gtggccgactggaccgacgaagccatcgaccgcctgcatcgcggtggccatgacatggtg
aagatccatgcggcttatcaccgcgccgcgcagcatcgcggacaacctaccgtgattctg
gcgcagacgaaaaaaggcttcggcatgggcgccgcgggccagggcaagatgacgacgcat
cagcagaaaaagctggacgatgaagcgctgctggcgtttcgcgaccgctttgccttgccc
atttcagatgccgactgcctggccctgaagttctaccgcccggcagaagacagcgccgaa
ctgcgccacctgcaagcccgccgcgcggcgctgggcggccacatcccccgccgtcgcacc
gaatctccacgcctggcgccgcccgccgtcgaacagtgggcgcgcttcgcgctggccgcc
gacggcaaggaaatgtcgtccaccatggccatcgtgcgcatgctgaccgggctgctgaaa
gacgccacggtgggctcgcgcattgtgcccatcgtggctgacgaggcccgcaccttcggc
atggccaacctgttccggcagatcggcatctattcagcgcaaggccagttgtacgaaccc
gaggacatcggctcggtgctgtattaccgcgaagcgcgcgacgggcagatccttgaggaa
ggcattaccgaagccggcgcgatttcgtcgtggacggcggcgggcaccagctattcggtc
aacggcttgccgatgttgcccttctatatctattactcgatgttcggcttccagcgcatc
ggcgacctgatctgggccgccgctgaccaacgcacgcgcggctttttgatcggcgccacg
tcgggccgcaccacgttgggcggcgaaggcttgcagcatcaggacggctccagccacatc
atggccgccgccgtgccgaactgccgcgcctacgatcccgcgtatgcgtttgaagtggcc
gtcatcgtcgaacacggcatgcgccgcatgctggacgagcagcacgacgaattcttctac
ctgaccgtcaccaacgaaaacctggcgcagcccgacatgcccaccgaccccgccgtgcgc
gtcggcatcctgcgcggcatgtaccggctgcgggccgcgcgcgtacaggcacaggtccgg
ctgctgggcgccgggcccatgctgcgcgaagccgacatggcggccgaccggctgcacgct
gactacggcgtggatgccgaggtctggagcgtgaccagcttttctgagttggcccgcgat
ggccgccaagccgagcgcgcccgcgtcctgggcctggaagccgccgacgacgcggattgg
gttcgcacctgcctgggcggcagcgacgcgccggtgattgccgccaccgactatgtgcgc
gccgtgcctgaacagatccgcgcctgggtgcccgcgccataccgcacgctgggcaccgac
ggcttcggccgcagcgacacccgcgcgcaactgcgcgacttcttcgaagtcagcgccgac
tggatcgtgctgtacgcgctggacagcctgggccggcaggaagacgccgacgccctgcgt
cagcgcctgaacgcgcgcacgcgccagacgccgccctgggagttgtag
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