Aquila chrysaetos chrysaetos (golden eagle): 115336860
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Entry
115336860 CDS
T08023
Symbol
DDX58
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
achc
Aquila chrysaetos chrysaetos (golden eagle)
Pathway
achc04622
RIG-I-like receptor signaling pathway
achc04623
Cytosolic DNA-sensing pathway
achc05164
Influenza A
achc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
achc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115336860 (DDX58)
04623 Cytosolic DNA-sensing pathway
115336860 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115336860 (DDX58)
05168 Herpes simplex virus 1 infection
115336860 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
achc04054
]
115336860 (DDX58)
Enzymes [BR:
achc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115336860 (DDX58)
Pattern recognition receptors [BR:
achc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
115336860 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115336860
NCBI-ProteinID:
XP_029860385
Ensembl:
ENSACCG00020013130
LinkDB
All DBs
Position
Z:complement(16618820..16646211)
Genome browser
AA seq
928 aa
AA seq
DB search
MTAEEKRSLQCYRRYIEKTLNPIYILGNMTDWLSDEVKERVRKEEEKGVTAAAALFLDAI
LQLEAEGWLRGFLDALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEVDPVA
LMPYINMCLIERECEEILQVSEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNTGYYN
ASELWDIREDNGKDVDGEMTDASENSFETMVTFSEEAECGNNLSENLCSASEGFYQSSPV
YEPKKARSYQTELAQPAIDGKNTLICAPTGSGKTFVALLIYEHHFQNMPSGQKAKVVFLA
TKVPVYEQQKTVFKQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNSIEE
GILSSLSIFTLMIFDECHNTTGNHPYNVLMSRYLEQKFDSASQLPQIVGLTASVGVGNAK
STKETIEHICTLCSYLDIQAISTVRENKQDLQRFANKPETHVRWVKMRVQNHFADIISGL
MSETEALMRRIYSVDTISQINKNDFGTQKYEHWIVATQKKCRLLQLADKEKESSICRDLF
ICTEHLRKFNDALIISEDARIEDALAYLTEFFTNVKNGPYTELEKKLTAKFQEKEPELTA
LSKDESNENPKLEELACILEEAYRYNPETHTLLFAKTRALVAALKKWIEANPLLSHIKPG
VLMGRGRRDQKTGMTLPMQKGVLDAFKTNKENRLLIATSVADEGIDISECNLVVLYEYFG
NVTKMIQVRGRGRAKDSKCILVTSKIEVVENEKHNRYKEEMMNEAIEKLQTWDETTFARK
IHDLQMKEKVLRDSRKKETRSKVVEGKKNLLCGKCKAYACSTDDIRVIKESHHTVLGDAF
KERYITKPHQKPVQFDCFEKKSKMYCQNTNCQHDWGIIVKYKTFDNLPVIKIKSFVLENV
ETGTQMDFQKWKNINFSLKNFDVEETSS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagaggagcctgcagtgctacaggcggtacatcgagaagaccctg
aaccccatctacatcctgggcaacatgacggactggctgtccgacgaggtgaaggagaga
gtccggaaggaggaggagaagggggtgacggcggccgccgcgctgttcctggacgccatc
ctgcagctggaggcggagggctggctgcggggcttcctggacgccctggttgcagcaggg
tacactggactggcagaagcaattgaaaactgggacttcagcaaactggaaaaactagag
ttgcacagacagctgttgaagcggatagaagcaacaatgctagaagttgatccggtagca
ctcatgccgtacataaacatgtgcctgatagaaagggagtgtgaggagatcctgcaggtc
agcgaatacagaagcaaagcagccgggataactaaactcattgaatgtctctgtcgatcg
gataaggaaaactggccaaaaagccttcagctagcactagataacacaggatattacaat
gcaagtgaactgtgggatataagagaagataatggcaaagatgtggatggtgaaatgaca
gatgcctctgagaacagctttgaaaccatggtgacgttttctgaagaagcagaatgtggt
aataatctcagtgaaaatctctgttcagcttcagaagggttctatcagtcttcacctgtt
tatgaaccaaagaaggctcggagctaccagactgaacttgcgcagcctgctatcgatggg
aaaaacacattgatatgtgcccctacaggatctggaaaaacttttgtggcacttctgatt
tatgaacaccatttccaaaacatgccctcaggacaaaaggcaaaagttgtctttcttgca
accaaagtgccagtgtacgaacaacagaaaactgtattcaagcagcattttgaaagaagt
ggatattctgttcaaggaattagtggtgaaacagttgcaaatgtctccgtagaaaaggtt
atacaggacagtgacatcattgtgctaacaccccagattcttgtgaatagcattgaggaa
gggatccttagctccctctccatcttcactctgatgatatttgatgagtgccacaacact
acgggcaatcacccttacaatgtgttaatgagtagatacctggaacaaaaatttgactct
gcaagccagctgcctcagattgtaggtttaactgcttctgttggagttggtaatgccaag
agcaccaaggaaacgatagagcacatctgtaccctctgctcctaccttgacatacaggcc
atatccactgtcagagagaacaaacaggatctgcagagatttgcaaacaagccagaaaca
catgtcagatgggttaaaatgagagttcagaatcactttgcagacattatctcaggtctg
atgtctgagacagaggcgttgatgaggaggatttactcagtggacactatctcccagatc
aacaagaatgattttggaacacagaagtatgaacactggatagttgccactcagaagaaa
tgcaggctgttgcaactggcagataaggagaaggagagcagcatttgtagagaccttttc
atttgcactgaacacctgcggaaattcaacgatgctctcatcatcagtgaagatgcccgc
attgaagatgctttagcctacctaactgaatttttcacaaatgtcaaaaatggaccatat
acagagttagagaagaaactgacagccaaatttcaagagaaagaaccagaactgactgcc
ctttcaaaagatgagtcaaatgagaatcctaagctggaagagcttgcttgcatcctggag
gaagcataccgctataacccagagactcacactcttctctttgctaagacaagagcctta
gtagctgctttgaagaagtggatagaagcaaaccctctacttagccacataaagccaggt
gtgttgatgggtcgtggaagaagagatcaaaaaacaggtatgaccctcccaatgcagaag
ggtgtgctggatgcgttcaaaaccaacaaagagaacagactgctaattgctacatctgtt
gctgatgaaggcattgatatttctgagtgcaaccttgttgtgctctatgaatacttcggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaaaagacagcaagtgcatc
cttgtgacaagcaaaatagaagtggttgagaatgagaaacacaaccgttacaaggaagaa
atgatgaatgaagctattgaaaagctacagacttgggatgaaacaacatttgcaagaaag
atacatgacctgcaaatgaaggaaaaggtattacgagattccaggaagaaagaaacaaga
agtaaggtagtggaagggaaaaaaaatcttctgtgtggaaaatgcaaagcatatgcctgc
agtacagatgacatcagagttataaaggaatctcatcacactgtcctaggagatgcgttc
aaggagcgttatataacaaagcctcaccagaaaccagtccagtttgattgttttgagaaa
aaaagcaagatgtattgccaaaatactaattgccagcatgactggggaatcatagtgaag
tacaagacatttgataatctaccagtgatcaaaatcaaaagctttgtattagagaatgtt
gaaactgggacacaaatggattttcagaaatggaagaatattaatttttctttgaagaat
tttgatgttgaagaaacatccagctga
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