Achromobacter sp. JD417: LN047_06340
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Entry
LN047_06340 CDS
T11120
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
achj Achromobacter sp. JD417
Pathway
achj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN047_06340 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achj03400
]
LN047_06340 (nth)
Enzymes [BR:
achj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LN047_06340 (nth)
DNA repair and recombination proteins [BR:
achj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LN047_06340 (nth)
Prokaryotic type
LN047_06340 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XGB28925
LinkDB
All DBs
Position
complement(1381920..1382555)
Genome browser
AA seq
211 aa
AA seq
DB search
MNAAKRREIFARLKAANPTPTTELEYATPFQLLIAVLLSAQATDKSVNIATRKFFPQYGT
PEALLALGEEGLADYIKTIGLFRTKAKNAIATCKILIEQHGGQVPQTREALEALPGVGRK
TANVVLNTAFGQAAMAVDTHIFRVSNRTGIAPGKNVLEVEQKLMKFVPSEYLLDAHHWLI
LHGRYVCVARKPKCPQCGISDLCEFKQKTPA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccaaacgtcgagagatcttcgcccgcctgaaggcggccaaccccactccc
accaccgaactggaatacgccacgccgttccagttgctgatcgccgtgctgctgtcggca
caggcgaccgacaagtcggtcaacatcgccacgcgcaagttcttcccgcaatacggcacg
cccgaggccctcttggcgctgggcgaggaagggcttgccgactacatcaagaccatcggc
ctgtttcgcaccaaggcgaagaacgcaatcgccacctgcaagatcctgatcgagcagcac
ggcggccaggtgccgcaaacgcgcgaggccctggaggccctgcccggcgtcggccgcaag
acggccaacgtggtgctcaacaccgcgttcggacaagcggccatggcggtggacacgcat
atattccgcgtctcgaatcgcaccggcatcgcgccgggaaaaaatgtgctggaagtcgag
caaaagctcatgaagttcgtgcccagcgaatatctgctggatgcgcatcactggcttatc
ctgcacggccgctacgtttgcgtggcgcgcaagccgaagtgcccgcaatgtggcatttcc
gacctctgcgaattcaagcagaaaacgcctgcctga
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