Achromobacter sp. JD417: LN047_06945
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Entry
LN047_06945 CDS
T11120
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
achj Achromobacter sp. JD417
Pathway
achj00010
Glycolysis / Gluconeogenesis
achj00020
Citrate cycle (TCA cycle)
achj00620
Pyruvate metabolism
achj00785
Lipoic acid metabolism
achj01100
Metabolic pathways
achj01110
Biosynthesis of secondary metabolites
achj01120
Microbial metabolism in diverse environments
achj01200
Carbon metabolism
achj01210
2-Oxocarboxylic acid metabolism
Module
achj_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
achj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LN047_06945 (mdeB)
00020 Citrate cycle (TCA cycle)
LN047_06945 (mdeB)
00620 Pyruvate metabolism
LN047_06945 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LN047_06945 (mdeB)
Enzymes [BR:
achj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
LN047_06945 (mdeB)
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Paralog
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Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
XGB29045
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Position
complement(1509927..1512614)
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AA seq
895 aa
AA seq
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MLDPRQPLPGSALQDDADPAETAEWREALQSLLQADGAERAGYVLDSVLGHAASLGLRAN
SQTRTAYLNTIPADQEPPFPGNLAVEERIARINRWNALAMVVRANQAHGELGGHIASYAS
AADLFEVGFNHFFRARTDGSPGDIVYMQPHSAPGVYARAFLEGFLGEDDLAHFRQEITAT
TRGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLVPGADRKVWGI
FGDGEMDEPESIAALTLAAREKLDNLIFVVNCNLQRLDGPVRGNGRIIDELETLYAGAGW
NVIKLVWGSDWDALLRRDTGGALARAFANTVDGQFQTFAANDGAFNRAHFFNQNPELAAL
VADWSDDAIDRLHRGGHDMVKIHAAYHRAANHRGQPTVILAQTKKGFGMGTAGQGKMTTH
QQKKLDDEALLAFRDRFALPISDADCLALKFYRPAEDSAEMRHLQARRAALGGYIPRRNA
EAPRLAPPDADQWARFALAADGKEMSSTMAIVRMLTALLKDATVGPRIVPIVADEARTFG
MANLFRQIGIYSAQGQLYEPEDIGSVLYYREARDGQILEEGITEAGAISSWTAAGTSYSV
NGLPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGRTTLGGEGLQHQDGSSHI
MAATVPNCRAYDPAYAFEVAVIVEHGMRRMLDEQCDEFFYLTVTNENLAQPDMPQDPATR
EGILRGLYRLRPARGKAQVRLLGAGPMLREAELAAARLQDEFGVDAEVWSVTSFSELARS
GRQAERARVLGLEAPQDQDWVHTCLAGSDAPVIAASDYVRAVPEQIRAYVKAPYRTLGTD
GFGRSDTRARLRDFFEVGADWIVLHALDSLDRQDDARTLRRALSVGSRQAPPWEI
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccctcgccagccccttcccggatcggccctccaggacgacgccgaccccgcc
gaaaccgccgaatggcgcgaagcgttgcagtccctgctgcaggccgacggggccgagcgc
gcgggctacgtgctggacagcgtcctgggccacgccgcctcgctcgggctgcgcgccaac
agccagacccgcaccgcctacctgaacaccattcccgccgaccaggaaccgccctttccc
ggcaacctggccgtcgaagagcgcatcgcccgcatcaaccgctggaacgcgctggcgatg
gtggtgcgcgccaatcaggcgcatggcgagctgggcggccacatcgccagctacgcgtcg
gccgccgacctgttcgaagtcggcttcaaccatttctttcgcgcccgcacggacggcagc
ccgggcgacatcgtctacatgcagccgcactcggcgcccggcgtctacgcgcgcgccttc
ctcgaaggctttctgggcgaagacgacctggcgcatttccgccaggaaatcaccgccacc
acgcgcggcttgcgcggcctgtcctcgtacccccatccgtggctgatgccggatttctgg
cagttccccaccggctcgatgggcatcggtcccatcaacgccatctaccaggcgcgcttc
atgcgctatctggaacatcgctcgctggtgcccggcgccgaccgcaaggtgtggggcatc
tttggcgacggcgaaatggacgagcccgaatccatcgcggcgctcacgctggccgcgcgc
gaaaagctcgacaacctgatcttcgtcgtcaactgcaacctgcagcgcctggacggcccg
gtgcgcggcaacggccgcatcatcgacgaactcgaaaccctgtacgccggcgcgggctgg
aacgtcatcaagctcgtctggggcagcgactgggacgcgctgctgcgccgggacaccggc
ggcgcgctcgcccgcgccttcgccaacaccgtggacggccagttccagaccttcgcggcc
aacgatggcgcattcaaccgcgcccatttcttcaaccagaatcccgagctggcggcgctg
gtggccgactggtccgacgacgccatcgaccgcctgcaccggggcggccatgacatggtg
aagatccacgccgcctatcaccgcgccgcgaaccatcgcggccagcccaccgtcatcctc
gcgcagaccaagaaggggtttggcatggggacggccggccagggcaagatgaccacccat
cagcaaaagaagctggacgacgaagcgctgctcgcgttccgcgaccgcttcgcgctgccg
atttccgacgccgactgcctggcgctcaagttctaccgccccgccgaagacagcgccgaa
atgcgccacctgcaggcgcgccgcgccgcgctgggcggctatatcccgcgccgcaacgcc
gaggccccgcggctcgcgcccccggacgccgaccaatgggcgcgctttgcgctggcggcc
gacggcaaggagatgtcgtccacgatggccatcgtgcgcatgctgaccgcgctgctcaag
gacgcgaccgtgggcccgcgcatcgtgcccatcgtcgcggacgaggcgcgcaccttcggc
atggccaacctgttccggcagatcggcatctattcggcgcaaggccagctctatgagccc
gaggacatcggctcggtgctgtactaccgcgaggcccgcgacggccagatcctcgaagaa
ggcatcaccgaggccggcgccatctcgtcctggacggcggccggcaccagttactcggtc
aacggcctgccgatgctgccgttctatatctattactcgatgttcggattccagcgcatc
ggggacctgatctgggccgccgccgaccagcgcgcccggggctttctgatcggcgccacg
tcgggccgcacgacactgggcggcgaaggcctgcagcaccaggacggctccagccacatc
atggccgccaccgtgcccaattgccgcgcgtatgacccggcctacgcctttgaggtcgcc
gtcatcgtcgaacatggcatgcggcgcatgctggacgagcaatgcgatgaattcttctac
ctgaccgtcacgaacgagaacctggcgcagcccgacatgccccaggatcccgcgacgcgc
gaaggcatcctgcgcggcctgtaccggctgcggcccgcgcgcggcaaggcgcaggtccgc
ctgctcggcgccggccccatgctgcgcgaagccgagctggccgccgcccgcctgcaggac
gaattcggcgtggatgcggaagtctggagcgtgaccagcttttcggagctggcccgcagc
ggccgccaggccgagcgcgcacgcgtgctgggcctggaagcgccgcaggaccaggactgg
gtgcacacctgcctggccggcagcgacgccccggtgatcgcggccagcgactacgtgcgc
gccgtgcccgaacagatccgcgcctacgtaaaagcgccctaccgcacgttgggcacggac
ggtttcgggcgcagcgacacgcgggcgcgcttgcgcgatttcttcgaggtcggcgccgac
tggatcgtgctgcatgcgctggacagcctggacaggcaggacgatgcgcgcaccttgcgc
cgcgccttgagcgtcggcagccgccaggcgccaccgtgggaaatctag
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