Acanthisitta chloris (rifleman): 103797003
Help
Entry
103797003 CDS
T08456
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
achl
Acanthisitta chloris (rifleman)
Pathway
achl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103797003 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
achl03400
]
103797003 (LIG4)
Enzymes [BR:
achl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103797003 (LIG4)
DNA repair and recombination proteins [BR:
achl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103797003 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Tox-REase-9
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103797003
NCBI-ProteinID:
XP_009067442
UniProt:
A0A091MKK3
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASTPVPQPPPKKTVASHVPFADLCTTLERIQKCKSRPEKAKYFKDFLDSWRKFHNALHQ
NEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLHLPKDGKDAAKLLNYRTP
TGSRADAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNVAKNKGQLKKSLLQLI
TQSTALEQKWLIRMIVKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSL
SDVSITLFSAFKPMLAAIADVQQIEKQMNNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNNQKLGHEVLSKRYEILSSVFTPVKGRIHVVQKKSARTRKEVI
DALNEAIDNREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPPPNEKPIIFHSICRVGSGYTMKELYDLGLKLSKHWKPYHRKDPP
YNILCGTEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEGLRSRAQGKLASKHLHIDEYDEPREKKRKTVPKVRKVIGIAEQFKAPDLSSVSKV
SNLFEDVEFCVMTGTGKYSKSELESRIAQCGGSVVQNPGPETYCVIVGAENVRVKNIIAS
NKYDVVRAEWLLQCFQTKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVAQLK
EVFSRIRDNKAMPLDTIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPQSKIHGTTLS
TRALELRFYGAKVVSHLAEGVSHVVIGEDHSRIEEMKALRRTFGRKFKIVSELWVTQSVE
DGVAKNENQYLL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaccagttccacagcctcctcctaagaaaacggtggcctcccatgtgcct
tttgcagatctgtgtactactctggagcgaatacagaagtgtaagtctcgcccagagaaa
gccaagtatttcaaggattttctggattcctggaggaaattccacaatgcacttcatcag
aatgagaaagacgtcaccgattccttttatccagctatgcggcttatccttccacagttg
gaaagagaaaggatggcatatggaatcaaagaaactatgctcgccaagctgtacattgaa
ctgcttcatttaccaaaagatggaaaagacgccgcaaagcttttaaattacaggacacct
acaggctcgcgtgcagatgctggggattttgcaatgattgcatactttgtgctaaaacct
cgcagccccaaacaaggcagactcacgatagaacaggtcaatgaacacttagatgccata
gctaataataatgttgctaaaaacaagggtcagttaaagaaaagtcttcttcagttaatt
acgcagagcacagcgctggaacaaaaatggctcatccggatgatcgtaaaggatctaaag
cttggtgtgagtcaacagaccatattttccatttttcatcccgacgctgctgaattacac
aacgtcacaactgatttggaaaaggtttgcagacagctgcatgatccctctgtctcactt
agtgatgtttctatcacgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccagcaaattgagaagcaaatgaataaccaaacattctacatagaaactaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtctataagtatttttcccgaaatggg
tttgactatacccagcagtttggtgcttcaccccttgaaggttcattaacgccatttatt
cataatgtatttaagagcaatatacaaaactgcattctggatggtgaaatgatggcttac
aatcctgagacacagacttttatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtgttcgatgtattgatggtcaacaatcag
aagttgggccacgaagtgctaagcaaaagatatgaaatcttaagtagtgtgtttacccca
gtaaagggcaggatacatgttgtacagaagaaaagtgccagaacaagaaaggaagtaatt
gatgctttaaatgaagcaatagataacagagaggaagggattatggtgaaggatcccatg
tccatctataagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtc
aatggactgatggatgaactagaccttttaattgttggtggttactggggtaaggggtca
cgtggtggaatgatgtctcattttctgtgtgctgttgcagagacacctcctccaaatgaa
aaaccaatcattttccactctatttgtcgtgttggctctggctatactatgaaggagttg
tatgatctaggtttgaaactgtccaaacactggaagccctaccataggaaggaccctccc
tataatattttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atcgttcagatcaaggcagctgagattgttgacagtgatatgtataaaactgactgcact
ttgagattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgact
tcagacatgttagaaggtctcagaagcagagcacaagggaagctggcgtctaagcacctt
catatagatgagtatgatgagccacgtgagaaaaaaaggaaaactgtgccaaaggtgagg
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatctatttgaagatgttgagttttgtgttatgacaggaacaggaaaatactcaaag
tctgagctggaaagcagaatagcccaatgtggtggcagtgtggtacagaacccagggcca
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacatcatcgcttcc
aacaaatacgatgtggtgagggcagagtggctcctgcagtgttttcaaaccaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgca
cgtgaatatgattgttatggagacagctacacagcaaacacagatgttgcacagctcaag
gaagtgttctcgagaatcagagacaataaggcgatgcctttggacacgattgcagagtta
gaagagcgttattcatggaacagttgtcagctcagtatattcagaggaaacactatttat
gtggactgttatgctgttgttaatgagccccaaagcaaaatccatggaacgacactatcg
actcgagctttggagctccgtttttatggtgcaaaggtagtctctcaccttgcagagggt
gtttcccatgttgtcataggagaagatcattcccggatagaagagatgaaagcactcagg
agaacatttgggaggaaatttaaaattgtatctgagctgtgggtaacacagtcagtggag
gatggagtcgcaaagaatgaaaatcagtacctactttaa
DBGET
integrated database retrieval system
