Acanthisitta chloris (rifleman): 103798245
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Entry
103798245 CDS
T08456
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein C5orf42 homolog
KO
K22859
protein JBTS17
Organism
achl
Acanthisitta chloris (rifleman)
Brite
KEGG Orthology (KO) [BR:
achl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
achl03037
]
103798245
Cilium and associated proteins [BR:
achl03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
103798245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
103798245
NCBI-ProteinID:
XP_009068744
LinkDB
All DBs
Position
Unknown
AA seq
2722 aa
AA seq
DB search
SLPYQIRWVQQTCSLVNLVPPCVSVKSRGALLCAFARDGLLLAVAVNQTDPKATQVLFLN
TLNFVTVSGSLKGCSSKSSMIPSKFIRSYWVGDMSWTPDSIFLACMLKSGSLILLTCMGE
LLTLTTSGCSVEFGPAQFIPFHPLITYRQQHSFCQDSSQSLGSSASEHDLMRQRFSVASH
SRLPYLIVSDGYMITVLRFPNNFSPSGFIRSLLLDSAQQLENIRRNLLNSKSVVKSRCLR
SLLSLKASLLKQVQNQSSIFSTIPKFLEENTTEMSEKTMDLQDYEDESDDEKQFCNSPSS
FCNQRTRSFVGKADQGHLEFASMFDAIHAEDDTEEKDKSSLELCSIQKNLLAAWQIGVSK
SMEEKDTLLNYTVNCIIHLFSIVHFVKCSLLNQETSLNKSVKDAQWMHCVLKYFQQCLTV
LCWHSRASLTGHVTKLTLETLRLMLMQQQDQLFSKNLLACFCLLKMVSQTLSNVCVLQYE
NFFASPDGNIPVELDSLTMPVFLILDDNTTQQFSLLKSLLKEPPQVNHDAKTEKRLIVLW
RLLYKKVVWYQVQLKRKVNKNAEEAFVVSLLLSHIQATLQSSRVTLEQHLKINSVSGEEQ
FLLGSYRESVNIWKRDLCEIKAKGGKRTCFLQSRYYLAILFCHLYQYNLCEAQGLCDHLV
GEILRRSQLSTSEMEKFSGMFILPKNHELWMVTSIHTDAAMAVIRSMARFMAAYFTNQLL
YIFPPHSVGILHPLHIKQGLSPRVIPLQHSLVTRAVRDQNLSSVWTAEYTLDLFFIGGLI
PEAVWLAHTLGDWKLSVSVGVAYQLYCQNSDEFSRLKNTEHHLPLSLSPMQTFQEKLQSL
LGQPVTSETSEHIKYKKFTDPIEEEDANVLYSSVQELLKAAVMADADILSETFRLLMDSA
KDLSRKLHGLVPVGLYLPAPPLYCPQPTFLSEENGNDILLKMEREIRQKVSGVLQRIILL
FRAAHCSCPAAQWYIRQLKWARKVMQKIRVKGSLPSLGPFPETLLSYSNFHTIFYRSASS
EDNRFDDITCKILGWFRELCALCWMFHVREKLSDSCRRYQAARENTNNTKDLQKSEYDAS
TVEHCLNAVEWACRMLPFCRFMNAEELVQDVILSLLGELPPVKKVAEIFAKAFPNPEDIR
VPLREKYHGLQQRLRNSIVKGPESEEMMSAVIQTAEKVRMKTLKCVTKNIGPVEINIWEP
AEERAADDEEHCYDRFSVGTSLSTSTLTDLGNPQISSDADTADTISDALFTEEARTQVPS
FQRYEKNGSRKLSIXIRGEKKERKVVSCXSNNVYKKDIQNQHNLPVVGTWEFERDDDEYV
KFLELFLSYILEKDLINYSDSGIPFLTSFSGLLRERELNSLFFDVHTTLKRRQGKTRSQN
VFTAGSCYTVSLESCDAETTSVYNENQNVLAKPTIVRTAEPSVHNLMKGLHEGLFGLKYK
SIYRAQSDNQGVTVALASQAFPYHTSCSLQTQANSKYFYKTVDVVDTVPGKELAIDLMGE
LSNIAKLLEWMIRWSEKRLLCGSNKQDSLEEIHPIIRIKTSAAAVLTSLWLLETKSIKCK
HPDNQCLEEFAPLSEAQFRTEKESSTDEGSSITANPPPDTQDVQAYDDLCEMDFGNADIP
LSDGQPSRTVVSTISSVASHTSVCAKKQEVKEEIPAEEKLNTSETCRQMLQDEMFKLVQL
QQINFMSLMQLVQSSFANVPNVQQMLQLHQSVQLAGSQATHTAEGNGLPETQLPTQENKE
KPGQKSSDFQPRNSLEDESVNGHLKNHPDMNASLTLFESHSKETGFMSPSQDLHSSVPSK
PLHLLTPSSDIQKTLKFIPVEKKTSYSNGFPLLKLKSDYHFKPAFLDSTEVSSASDRPPP
VPRVAWCSSDTLWTHQSPYTRGKTKAKEDFNRRGYYPEIPRQRHEKEKRWAERVHKGPPK
HLNLDQYEGQQEVTPQQQFSANVHEYKDKAPITHNLVGIPLLHLQLDPVPRLPPTVRQPI
TATLIPVKPATKDTDSRETLQDTGISLLKADLFQKKKVPKLIPLQDLIAFEQRHQHHSVP
GTSFGQDQTEPIQLLKTDVEPFKPRDVQNNRKRKKRRNKKQMKEKEKEKKPSVSFRPEDS
IISINDTAMVDESGTGTPILYCHISDTVTTSADLHYMASVGKKPAETQDASTNTPPVLEP
YQDHIISDGNEVSEVQEHEPVMSIPVSESSSSPAILPPDMHLNLRFPTEVDERPLPSFLS
DAPDLHEHEYISVIDIEDSDILNDLPMIPESAEEIATAQQNVKLEIPSTAKLHHIAASVT
DAIPPEVLQKQVQDDHQKNVSSQVQKTDKSDSAIDHITWSILHEDVRTLPCSGLPSKVIG
RGYSSTKQQEMDMQLQTLQNITENMEKDFRNARLLVKLIEDFEMAENSDLGAPSFLPDAA
GVTSDASERYLTNMIFEDVTGDQKEGLNLECPVPSYTTVEVHSPAFVALASDFPSGVKSS
SGSHIWRDLRDRVHDSAAGHPRKTEKERKEIQTWMKRKQKERMREYLKKLDEQRQKERNP
FNLRRNHHRLTSKDIRALQKKKEEKDRALLSEHHSARISEALFLMSEMLSDTVVLPANKP
LSRTTSPQVRSERSRVAAKPSFGHKVQRFTPALGLTQPRAAEYRVSRTSKQKPPQVATEV
QTEDVDQESDRDVVSPWTVPDDIQRILQDTHDSIFQASALSPMGFSPLGSINTDSVSEST
GSILSKLDWNAVEAVVADVEDK
NT seq
8170 nt
NT seq
+upstream
nt +downstream
nt
ttctctgccataccagatccgttgggtacagcagacttgttccctcgttaatttggttcc
tccgtgtgtgtctgtgaagtcaagaggagctttgctatgtgcatttgccagagatggact
tctgcttgcagtggctgttaatcaaactgatccaaaggcaactcaggttttgtttctaaa
tacactgaattttgtaactgtttcgggtagtcttaaaggttgtagtagcaagagtagcat
gattccatccaagtttatcagatcttactgggttggcgatatgagttggactcctgatag
cattttcttggcttgcatgttaaaaagtggatctttgattttgttgacatgtatgggtga
attgctgactttaactacttctggctgctctgtagaatttggaccagcacagtttattcc
atttcatccactaataacatacagacagcaacactctttttgtcaagactctagccagtc
tcttggttcttcagcttctgaacatgacctcatgagacagagattctctgttgcttcaca
ttcaagattaccctacctcattgtctctgatgggtatatgataacagtgcttagatttcc
taacaacttttcaccatcaggatttataagatcccttttgcttgattcagcccaacagct
tgaaaatatccgtcggaatttgctgaactccaagtctgtagtgaaatctcggtgtttacg
atcactgttgtccttaaaagctagtcttttaaaacaagttcaaaaccaaagttccatctt
ttccacaattccaaaattcctggaagagaacacaacagaaatgagtgagaaaaccatgga
tttacaggattatgaagatgaatcagatgatgaaaagcagttttgcaatagcccttccag
cttctgtaaccaaagaacccgttcatttgttggtaaagctgatcaaggccacttagaatt
tgcatcaatgtttgatgctatccatgcagaagatgatactgaagagaaagataaatcatc
attggaactatgctccattcagaaaaacctccttgctgcatggcagataggggtttcaaa
aagtatggaagagaaagatacattactgaattacacagtgaactgcattatccatttatt
cagcattgttcattttgtgaaatgttctttgctaaaccaggaaacatctttaaacaagtc
tgtgaaggatgctcaatggatgcattgtgtcctcaagtattttcagcaatgtttgactgt
cttgtgctggcattcaagagccagtctgactgggcatgtgacaaagctgacattagaaac
tttaagactgatgcttatgcagcaacaagatcagttgttctcaaaaaaccttttggcatg
cttctgtcttttgaaaatggtttctcaaactctaagtaatgtgtgtgtgctacaatatga
gaatttttttgcatctcctgatggtaacattcccgtggaacttgactccctcactatgcc
tgttttcttaattcttgatgacaacactactcagcaattcagcttactgaaatctctgct
taaagagcctcctcaagtaaaccatgacgcaaaaacagaaaaaaggttgattgtactatg
gcgattattgtataagaaagtggtttggtatcaggtgcagctgaaaagaaaagtgaacaa
gaatgcagaagaagcctttgttgtctcgttgcttttaagtcatatacaagcaaccctcca
gtcttcacgagtgacattagaacaacatctgaagatcaattctgtatccggtgaggaaca
gttccttttagggtcatacagagaatctgtgaacatttggaagagagatctctgtgaaat
caaggcaaaaggagggaaaagaacatgttttcttcagagtagatattatcttgcaatatt
gttttgccatctgtatcagtataacttgtgtgaggctcagggactctgtgatcatctggt
gggcgagattctaaggcggtcacagctctcaacaagtgagatggaaaaattttctggtat
gtttatattgccaaaaaatcatgaactctggatggtaaccagcattcatactgacgctgc
catggctgtgattcgatccatggcacgattcatggctgcttatttcacaaatcagctgct
ctacatctttcccccacacagtgttggcatcctgcacccacttcacatcaaacaaggctt
atctcctcgtgttattccactgcaacactctttggttaccagagctgtcagggaccagaa
cctttcatctgtgtggacagctgaatatactcttgatttgttctttattggtggactcat
tccagaggctgtgtggttagcacacacactcggggattggaaactctctgtttcagttgg
cgtggcctaccagctgtattgtcagaactctgatgaattctcaagactgaaaaacacaga
gcatcacctgccattaagcttatcaccaatgcagacttttcaggaaaagttacagtcttt
gttaggacagccagtaacttcggaaacatcagaacacattaaatacaagaaatttacaga
tcccattgaagaggaagatgcaaacgttctttatagttcagtacaggaactactgaaagc
agctgttatggcagatgctgatattctctcagagacatttcggcttttgatggattctgc
caaggatcttagcagaaaattgcatggtttggttcctgtgggactgtatcttccagcacc
accattatactgtcctcagccaacttttctcagtgaagaaaatggcaatgacattctttt
aaaaatggagagagaaattcgtcagaaagtgtcgggagttcttcagcgaattatcctgct
tttccgggctgctcattgttcttgtcctgcagcacagtggtatattaggcaactgaagtg
ggcaagaaaagttatgcagaaaattcgagtgaaaggatctcttccttcactgggtccatt
cccagagactttgcttagttactccaatttccacactattttctatagatctgcatcttc
tgaagacaatcgtttcgatgatattacctgtaaaattttaggttggttcagagagctgtg
tgcattatgttggatgtttcatgttcgtgagaaattatctgacagttgtaggaggtacca
agctgcaagggaaaatactaacaatacaaaggatctgcagaagagtgaatatgatgcctc
cacagttgaacattgtctgaatgcagtggagtgggcttgtcgaatgcttcctttctgcag
gttcatgaatgctgaagaattagttcaagatgtaattttgagtcttcttggagaattgcc
accagtgaaaaaggtggcagagatttttgctaaagcatttcctaatcctgaagatataag
ggtgccactaagagagaaatatcatgggcttcagcagcgactcagaaacagtattgttaa
aggtcctgaaagtgaagaaatgatgtctgctgttatacagactgctgaaaaagtgagaat
gaagaccttgaaatgtgtaacaaagaacataggccctgtagaaattaatatttgggagcc
agcagaagagagagcagcagatgatgaagaacactgttatgacagattctcagtaggcac
tagtctaagcacaagcacacttactgatcttgggaatcctcagatatctagtgatgctga
cacagcagatacaatttctgatgctttgtttactgaagaagcaagaactcaagtgccttc
attccaaaggtatgaaaaaaatggcagcagaaagctttcaatttaaattaggggggaaaa
aaaggaaagaaaagttgtctcttgctgatcaaacaatgtatataaaaaagacattcagaa
tcagcataatttgcctgtagttggtacatgggaatttgaacgtgatgatgatgaatatgt
taaatttctagaactctttttgagttatattctcgagaaggacctgataaactacagtga
ctctggaattccatttcttactagcttttctggacttcttcgagagcgtgaattgaactc
tctgttttttgatgtccatacaacactaaaacgtcggcaaggcaaaactagaagccaaaa
tgtgtttacagcagggtcgtgctatactgtctccctggaatcttgtgatgctgaaacaac
atctgtctacaatgaaaaccaaaatgttttggcaaaaccaaccattgtacggacagcaga
accttcagtgcataacctaatgaaaggacttcatgaaggattatttggcttaaagtacaa
gtcaatttacagagctcaatctgacaatcaaggagtcactgttgcactagcaagccaggc
ctttccttaccatacttcctgtagcctgcaaactcaggcaaattctaaatacttttacaa
aactgttgatgtagttgatactgtaccaggaaaagaactggctatagacttgatgggcga
gttgagcaatattgcaaaattgcttgagtggatgatcagatggtctgaaaaaagacttct
ctgtggttcaaataaacaagattccttagaagagattcacccaatcatacgtataaaaac
atcagctgctgctgttcttacttctttgtggcttttagaaacaaagagcataaaatgtaa
gcatccagataatcagtgtctggaagaatttgcacctctatcagaagcccagttcaggac
agagaaagaaagtagcacagatgaaggctcttccataacggccaatcctcctcctgacac
ccaggatgtacaagcctatgatgatctttgtgaaatggattttggtaatgcagacattcc
tctaagtgatggtcagccttctcggacagttgtgtcaactatatcaagtgttgcctccca
tacttctgtttgtgcaaagaagcaagaagtcaaggaagaaatccctgcagaagagaaact
aaacacatcggaaacttgcaggcagatgctccaagatgaaatgtttaagttagttcagct
acagcagatcaacttcatgagtttaatgcaactagtgcagtcgtcctttgccaatgtacc
aaatgttcaacaaatgttgcaactgcatcagtctgttcagctggcagggagccaggctac
acacactgctgaaggcaatggtcttccagaaacacagctgcccactcaagaaaataaaga
aaaaccaggtcaaaagagctctgattttcaaccaaggaatagcttagaagatgaaagcgt
caatggccatttaaaaaatcatccagatatgaacgcctctttaaccctatttgaaagcca
cagcaaggaaacaggatttatgtcaccatcccaagatttgcattcttcagtgcctagtaa
accacttcacctcctaaccccttcctcagacatccagaaaacactgaagtttatccctgt
tgaaaagaaaacaagttactcaaatggatttcctttacttaaactcaaatcagattatca
tttcaaaccagcattcttagattccacagaagtgtcatcagcttctgaccgaccaccccc
tgtaccacgagtagcttggtgttcatcagataccttgtggacccatcagtcaccatacac
acgaggaaagactaaggcaaaagaggattttaacaggcgtggatattaccctgagatccc
aaggcaaagacatgagaaagagaagagatgggcagaaagagtgcataagggtcctcccaa
acacctgaatctagatcagtacgaaggacagcaagaagttacacctcagcagcagttctc
tgcaaatgtgcatgagtacaaagacaaagcacccatcactcataacttggttggtattcc
actattgcacttacaacttgacccagtacctagacttccaccaactgtgagacagccgat
caccgctactttaatacctgttaaacctgcaacaaaggatactgactccagagaaacact
acaggatacaggaatttcactacttaaggctgatttatttcaaaaaaagaaggtaccaaa
actcattccacttcaagatctcatagcatttgagcaacgccaccagcatcattctgtgcc
tggtacttcttttggacaagaccaaactgaacctatccagttactaaaaacagatgttga
acctttcaaaccaagagatgtgcagaacaatagaaaaagaaaaaagaggcgtaataagaa
gcaaatgaaagagaaggagaaggagaagaaaccaagtgtgtccttccgcccagaggactc
gattatcagtatcaatgacacagcaatggttgatgaatcagggactgggacacctatttt
gtattgtcacatttcagacacagttactacttcagcagatctacattatatggcttctgt
aggaaaaaaaccggcagaaactcaagatgcaagtacaaatactcccccagtgctcgaacc
ttatcaggatcacataatcagtgatggaaatgaggtttcagaagttcaagaacatgagcc
agtcatgtctattcctgtgtcagaatcatctagttccccagcgatattaccaccagacat
gcatttaaacctgagattccccactgaagtggatgagagacctttgccatcctttctgtc
agatgcacctgacctgcatgaacatgaatatatcagtgtgattgacattgaagacagtga
catccttaatgatttgcccatgatacccgagtctgcagaagagatagctactgcgcagca
aaatgtgaagctggaaattccatctactgcaaaacttcatcacatagcagcttctgttac
tgatgcaattccacctgaggtgcttcagaagcaagttcaagatgatcatcagaaaaatgt
atcaagccaagtgcaaaagacagataagtcagattctgctatagatcatataacttggag
catactacatgaagatgtcagaactcttccttgttcagggcttccatccaaagttattgg
cagaggatactcttccacaaagcagcaggaaatggatatgcagttacagaccctacagaa
catcacagaaaatatggagaaggatttcagaaatgccagactgttagtgaaactaataga
agattttgaaatggctgagaattcagaccttggtgctccttctttcttacctgatgctgc
tggagtcactagtgatgcatcggaacgttatctgacaaacatgatttttgaagatgtcac
aggtgatcaaaaggagggcttaaacttggaatgccctgttcccagctatactacagtgga
agtacattctcctgcctttgtagccttggcttctgactttcccagtggtgtgaagtcatc
ttctggctctcacatatggagagatctacgtgatagggttcatgattctgctgctggaca
tcctcgaaaaacagaaaaggagaggaaagagatacaaacatggatgaaaagaaagcaaaa
ggaaagaatgagagaatatttgaagaaactggatgaacaaagacagaaagaacgtaatcc
atttaatctaagaaggaatcatcataggcttacttcaaaggatattagagccttacagaa
gaagaaagaagaaaaagacagagccctgctgtctgaacatcacagtgcgagaatatcaga
ggccctttttctgatgagtgaaatgttatctgacacagtggtgttaccagcaaataaacc
attgtccagaacaacgtcacctcaagtgcgatcagaaaggagcagagttgctgccaaacc
cagctttgggcacaaagtacagcgtttcaccccagctcttggtttaacacagcccagggc
tgctgagtacagggtaagcagaacctccaaacaaaagcctccacaggttgccactgaagt
tcagacagaagatgtggatcaagaatctgatcgagatgtagtaagtccttggactgtgcc
tgatgatatccagagaatacttcaagatactcatgactccatttttcaggcctctgcact
gtcccccatgggtttctctcctcttggcagtatcaacactgacagtgtttcggagagcac
aggaagtatcctcagcaagctggactggaatgcagtggaggctgtggtagcagatgtgga
agacaagtga
DBGET
integrated database retrieval system
