Acanthisitta chloris (rifleman): 103802335 Help Entry 103802335         CDS       T08456                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism achl  Acanthisitta chloris (rifleman) Pathway achl04010   MAPK signaling pathway achl04120   Ubiquitin mediated proteolysis achl04140   Autophagy - animal achl04144   Endocytosis achl04620   Toll-like receptor signaling pathway achl04621   NOD-like receptor signaling pathway achl04622   RIG-I-like receptor signaling pathway achl05132   Salmonella infection achl05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:achl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103802335 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103802335 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103802335 (TRAF6)    04140 Autophagy - animal     103802335 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103802335 (TRAF6)    04621 NOD-like receptor signaling pathway     103802335 (TRAF6)    04622 RIG-I-like receptor signaling pathway     103802335 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103802335 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103802335 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:achl04131]     103802335 (TRAF6)    04121 Ubiquitin system [BR:achl04121]     103802335 (TRAF6) Enzymes [BR:achl01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103802335 (TRAF6) Membrane trafficking [BR:achl04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103802335 (TRAF6) Ubiquitin system [BR:achl04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103802335 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-TRAF_2 Sina_ZnF PspA_IM30 CEP104_ZnF SlyX Med21 CENP-F_leu_zip DUF4455 HAP1_N DUF16 PUMA_CC DUF1664 ATG16 UPF0242 HMMR_N Spc29 DUF7607 ADIP Cortex-I_coil AAA_13 DM Motif Other DBs NCBI-GeneID:  103802335 NCBI-ProteinID:  XP_009073042 LinkDB All DBs Position Unknown AA seq 446 aa AA seqDB search DAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSA VECPQCQGAFQKNHLKEHMTQECPRRQVCCPNCATSMAYEDKELHDETCPLANVFCQYCN TVLIREQMPNHYDNDCPTAPVPCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQN ISVTATNPVPFINGLPFEPALFSHVSHAAYDCNPEVENFKETIQQLEGRLVRQDHQIREL IAKMETQNSHVAELKRTIRNLEGKITEMEAQQCNGIYIWKIENFSGLQRAQEEERPVVMH SPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILD QSEGPERQNHEEVMEAKPELLAFQRPTIHRNPKGFGYVTFMHLQNLKQRTFVKDDTLLVR CEVMTRLDLNSLRREGFQARSADGAV NT seq 1342 nt NT seq  +upstreamnt  +downstreamnt agacgcaggtcacaaatgtccagtagacaacgaaattctgctggaaaatcaactttttcc tgacaactttgctaaacgggaaatcctttccttaatggttaagtgtcccaacaagggctg cagtatgaagatggagctgagacatttagaggaccaccagttgcagtgtgatttttctgc tgtggaatgcccacagtgccaaggagccttccagaagaaccacctgaaagagcacatgac ccaggagtgtccaaggcgtcaagtctgttgtccaaactgtgccacatctatggcctatga agataaagagctccatgatgaaacctgcccacttgccaatgtattttgtcagtactgcaa cactgtgctcatcagagagcagatgcctaaccattatgacaatgattgtcctactgctcc agtgccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggc acgacatatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaa tatcagtgttaccgctaccaatcctgtacccttcatcaatggcctgccctttgagcctgc cctcttctcacacgtgtcacatgctgcatatgattgtaatccagaagttgaaaacttcaa agaaactattcagcagctggaaggtcgtctggtaaggcaagatcaccaaatcagagaact catcgctaaaatggagactcagaactctcacgtggcagaactcaaacgtactatccgaaa cctggagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaa gattgagaacttcagtggacttcagagagcccaggaagaagagagacctgttgtgatgca cagtcctggcttctatactggcaagcctggctacaagctgtgtttgcgcctgcatatcca attacccaacgctcagcgttgtgctaattttatatctctgtttgtccacactatgcaagg agaatatgacagccacctgccttggcctttccaaggcactatacgactttctattttgga tcagtcagaaggcccagaaaggcagaatcatgaagaagtaatggaagccaagccagagtt attggccttccagagaccaacaattcaccgcaatccaaaaggttttggttatgtgacttt catgcacctgcagaacttgaagcaaagaacctttgtcaaggatgatacccttctggtgcg ctgtgaggttatgacacgtctagatttgaacagtctgcgcagagaaggatttcaggctcg cagtgctgatggagctgtgtaa

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