Acanthisitta chloris (rifleman): 103808322 Help Entry 103808322         CDS       T08456                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism achl  Acanthisitta chloris (rifleman) Pathway achl04115   p53 signaling pathway achl04145   Phagosome achl04148   Efferocytosis achl04350   TGF-beta signaling pathway achl04510   Focal adhesion achl04512   ECM-receptor interaction achl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:achl00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     103808322 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103808322 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     103808322 (THBS1)    04148 Efferocytosis     103808322 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     103808322 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     103808322 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     103808322 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:achl04131]     103808322 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:achl00536]     103808322 (THBS1) Membrane trafficking [BR:achl04131]  Endocytosis   Phagocytosis    Opsonins     103808322 (THBS1) Glycosaminoglycan binding proteins [BR:achl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103808322 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  103808322 NCBI-ProteinID:  XP_009079349 LinkDB All DBs Position Unknown AA seq 1156 aa AA seqDB search SAESRSDDNSVFDLFELSGFMRKGAGRRGPGVYLVKGPESSSPAYRIEDASRIPAVPDSK FQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSGHVFSLVSNGKAGSLDLSLSV DGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKMENAELDIPIQNIFTRDLASS ARLRVAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSSSTSAIITLDNPINGSSPAIR TNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQDRVRKVTEENEIIAKVVQIT PGACIHNGIKHKNKDEWTIDSCTQCTCQNSATVCQKVSCPLMPCSNATVPDGECCPRCWP SDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCHLQECDKRFKQ DGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPCEGEARENKACQKDPCPINGN WGPWSPWDACTATCGGGLQKRSRLCNNPEPQYGGKTCVGEARGTQVCNKQDCPIDGCLSN PCFAGAVCTSSPDGSWKCGACPAGYHGDGIHCQDIDECKEVPDTCFVFNGVHRCENTEPG YNCLPCPPRFTGTQPFGHSVEDAMTNKQVCKPRNPCTDGTHDCNKNAKCNYLGHFSDPMY RCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPNLPNSGQEDYDKDGI GDACDSDDEDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRCDNCPYNHNPDQTDTDNNGEG DACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCDNCPLEHNPDQEDSDSDRIGD QCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLVA NPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEISETDFRRFQMIPLDPKGTSQND PSWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSR FYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGNTPGQVRTLW HDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGAIYDKTYAGGRLGLFVFS QEMVFFSDLKYECRDP NT seq 3471 nt NT seq  +upstreamnt  +downstreamnt tctgcagagtcccggagtgatgataacagtgtgttcgatctcttcgaactttctggcttc atgcggaagggagctgggcgccggggacccggggtgtacctggtgaagggaccagaatcc tccagccctgcctaccgtattgaagatgccagtcgcatccctgctgtccctgactcaaag ttccaagacttgttagatgctatccatgctgagaagggcttcatcctcctggccactctc cgtcaagccaagaaaagcagaggcacactgctgtccgtggaacagaaagatggctctggt catgtcttcagtctagtatcaaatggcaaggcgggctccctggacctgagcctttctgtt gatggcaagcagcagttagtgtcagtagaggatgccttgctggctactggacactggaag aatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaaatg gagaatgctgaattggacatccccatccagaacatcttcactagggacctggccagcagt gccaggctccgtgttgccaaagggggagtcaatgacaacttccagggactgctgcagaat gtgcggtttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctccagc tccactagtgcaatcattactttggacaaccccatcaatggttctagcccagctatccgc actaattacattggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgat gaactaacaaatatgtttgtggaactgcaagggcttcggtccatggttacaacacttcaa gacagggttcgcaaagtgactgaagaaaatgaaatcattgccaaagtggtacagatcact cctggagcatgtattcataatggcatcaagcacaaaaataaagatgagtggactattgac agctgcactcaatgtacttgccagaattctgccactgtatgccagaaagtgtcctgtcct ctcatgccttgttccaatgccactgtgcctgatggggagtgttgcccccggtgctggcct agcgactatgcagatgatggatggtctccttggtctgaatggacttcatgttctgtgacc tgtggtaatggcattcagcagagaggacgttcctgtgacagtctcaataaccgctgcgaa gggtcctctgtacaaactcggacttgccaccttcaggagtgcgataagaggtttaaacag gatggtggctggagtcactggtcaccgtggtcatcatgttctgtcacttgtggcacgggc atcatcactagaattcgcctctgcaactctccagtaccacaactgaatggcaaaccttgt gagggtgaggcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggcaac tggggaccatggtctccatgggatgcttgcacagcgacatgtggaggaggacttcaaaaa cgcagccgtctctgcaataatcccgagcctcagtatggtgggaagacttgtgtaggtgaa gctagagggacccaggtctgcaacaaacaggactgtcccattgatgggtgtctgtctaat ccctgctttgcgggggctgtatgtaccagctcccctgatggctcctggaagtgtggtgcc tgtcctgcaggctaccatggtgatggtattcactgccaggatattgatgagtgcaaagag gttcctgatacctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacctggg tacaactgtcttccttgtccaccacgtttcactggaacacagccatttggtcacagtgtt gaggatgctatgactaacaaacaggtctgcaagccacgtaatccatgcacagatggaaca catgactgcaacaagaatgccaaatgcaattaccttggacacttcagtgaccccatgtat cgctgtgaatgtaaaccaggctatgctggtaatggcataatctgcggagaagatactgac ctggatggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaa aaagataactgccctaatctacctaactctgggcaggaagactatgataaggatgggatt ggtgatgcctgtgacagtgatgatgaggatgatgggattcctgatgatcgggacaactgt ccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgctgt gataactgtccctacaaccacaaccctgatcaaactgacactgacaacaatggagaagga gatgcatgtgcaatagatattgatggagatggggtccttaatgaaagagacaactgccaa tatgtctataatgtagaccagagggatacagacttggatggtgttggagatcagtgtgat aactgtccactggaacacaatcctgaccaggaagactctgattccgaccgcataggtgat cagtgtgacaacaaccaggacattgatgaagatggccatcaaaataatcttgataactgc ccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt gaccacgatgatgacaacgatggtatccctgatgacaaagataactgcagattggttgct aacccagatcaagccgattctgatggtgatggacgtggagatgcttgcaaagatgacttt gaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagtgag actgatttccgaagatttcagatgattcccctggatcccaaaggaacatcccaaaatgat ccaagctgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgaccct ggtcttgcagttggttttgatgaattcaatgctgtggacttcagtggtaccttcttcatc aataccgaaagggatgatgattatgctggctttgtatttggctaccaatctagcagtcgt ttctatgttgttatgtggaagcagatcacccagtcttactgggactccacaccaaccaaa gctcaaggctactcaggtctctccattaaagttgtgaattccaccactggtccaggagaa caccttcgtaatgctctttggcacacaggaaacactcctggccaggtgagaactttgtgg catgatcctcgtcacataggctggaaagacttcactgcatacagatggcgtcttagccat agaccaaagactggtttcatcagggttgtaatgtatgaagggaagaaaatcatggcagac tcaggagcaatctatgataaaacctatgctggtggtcgactaggattatttgtcttctct caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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