KEGG   Acanthisitta chloris (rifleman): 103811461
Entry
103811461         CDS       T08456                                 
Symbol
AFF4
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
achl  Acanthisitta chloris (rifleman)
Pathway
achl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:achl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103811461 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:achl03021]
    103811461 (AFF4)
Transcription machinery [BR:achl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     103811461 (AFF4)
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 103811461
NCBI-ProteinID: XP_009082682
LinkDB
Position
Unknown
AA seq 974 aa
RAHGADHHGKEHSRSKSPRDPDASWDSPSRVPSFSSGQHPAQAFPPSLMSKSSSMLQKPT
AYVRPMDGQESMEPKLSSEHYGAQTHGGGVNELKPSSKAHLTKLKIPSQPLDASASGEVS
CVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNPSSKASNG
HQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSHSEPSQHNSEGADNSRD
DSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNSHKV
SPASSVDSNIPSSQGYKKEGRDQGAGSGYTDQAGSKDSISSTPGRDSKPTQKGSESSRGR
QKSPAQSDSSTQRXXXXXXXXXXXXTSVEEPRGGLKIESETPVDMATNIPSNRHKAATKG
SRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLPPSSQTPK
YSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDLSLLSRIPG
KPYKDADAAKAEKKSSAPEKHPRESQKQPSDKGSTKGKRKHKQNEDENRASESKKTKLEE
KAPSGHKTSSSRESSKPSAVKEKDLLPSPAAPVLQKDSKQEHGSRKRTVSQSSSLKSSSN
LGKESSSGSKSSSSSKQKKTEGKGSSSAKEAKEKAVNSSSSCPPASAQAAESTKSRRAKL
VFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSP
FPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKESALKYSK
TLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSGSSVTIP
QRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKAMGPLVFNTSIMTELVR
YTRQGLHWLRLDAK
NT seq 2925 nt   +upstreamnt  +downstreamnt
agggcccacggcgccgaccaccacggcaaggagcactcgcgctccaagtcaccgcgcgac
cctgacgccagctgggactcgccctcgcgggtgccctcgttctccagcgggcagcacccc
gcccaggccttcccgccctcgctcatgtccaagtccagttcgatgttacagaaacccacg
gcctacgtgcggccgatggacgggcaggaatccatggaaccaaagctatcctcggaacac
tacggcgctcagacccacggcggcggcgtcaacgagctcaagcccagcagcaaagcacac
ctgaccaagctgaaaattccttcccaaccgctggatgcgtcggcgtcgggcgaggtgagc
tgtgtggatgaaattctcaaagagatgacccattcctggcctcctcctctgactgctatc
catacaccctgcaaaactgaaccctccaaatttcccttcccaactaaggagtcccagcag
tccagttttggcactggagaacagaagcgatacaatccttcatccaaagcgtccaatggt
caccaatccaaatcatgtgaatcgaaccagacagatatgttgaaagatgacttaaaactt
agcagtagcgaagacagcgatggagagcaggactgcgataagacagtgccaaggagcaca
cctggaagtcactctgagccttcacagcataacagtgagggagcagataactcgagggat
gactcgagcagccacagtggctctgagagcagctctggctccgactcggagagcgaaagc
agctccagcgacagcgaagccaacgaaccgtcgcagagtgcgtcccccgagccagagcca
ccacccacaaacaagtggcagttggacaactggctgaacaaagtcaattcccacaaagtg
tcaccagcttcttccgtggacagcaatatcccatcctcccaaggctacaagaaggaggga
cgggatcagggagcagggagtgggtacactgatcaggctggatccaaggattccatctcc
tctaccccagggagagattccaaacccacccagaagggctcggagagcagtcgtggcagg
cagaaatcacctgcccagagcgacagctcgacacagagannannnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnagacatctgtggaggagcctagaggaggtcttaaaatagaaagtgaa
accccagtggacatggcaacaaatatcccttcaaacaggcacaaggcagccacgaagggc
tccaggaagcccaatataaagaaagagcccaagtcttcccctcggcctacaacagagaaa
aagaaatacaaggcttcaagcaaatctgcccagaaatccagggaattcatagaaacagat
acctcatcctctgattcagatgaaaatgagagtctgcctccttcatcacaaacccccaaa
tactctgagagcaataggactcctgttaaatcttccatggaggaggatgacagctttttt
cggcaaagaatgttctctcctatggaagagaaagagcttctgtccccactcagtgatcct
gatgaaaggtacccactcattgtgaagattgacctgagcctcttatccaggataccaggg
aagccttacaaggatgctgacgcagccaaagcggaaaagaagagtagtgccccggagaaa
caccccagggagtcccagaaacagccctcagacaagggctctacgaaaggcaaaaggaaa
cacaagcagaatgaggatgaaaacagagccagtgagagcaagaaaacaaaactggaagaa
aaagctccatcaggacacaagacttctagcagtagggagtcttcaaagccaagtgctgtt
aaagagaaggatttactgccatctcctgctgccccagtcctgcagaaagattccaagcag
gaacatgggtccaggaagaggacagtgagtcagtcatcatccctaaaatccagcagcaac
ctgggcaaggagagcagcagtggcagcaaaagcagctcctcctcgaagcagaagaagact
gaggggaagggctccagcagtgccaaggaagccaaggaaaaggctgtgaacagctcctcc
agctgccctcctgcctctgctcaggctgcagaaagcaccaagtcaaggagagcaaagctc
gtgtttgatgataggacctactcagctgatcactatttgcaggaagcaaagaagctgaag
cacaatgcagatgcattgtcggacaggtttgagaaggctgtgtactacctggatgctgtg
gtgtccttcattgagtgtgggaatgcattggagaaaaatgctcaggaatccaagtccccg
ttccctatgtattcagaaactgtggaattaatcaaatacactatgaaactgaagaattac
ttggcaccggatgcgacggccgcggacaagaggttggcagtgctttgccttcggtgccaa
gctctgctgtacctgaggctgtttaaactgaaaaaggaaagtgcattgaagtactcaaag
actctaactgaacatctgaagaactgctacaataactctcaagcaccatcacctggcatg
ggaagcaaacctgtggggatgccatctccagtctctccaaagctgtctccagggaattca
ggaaactactcttccggggcagccaacccttcagggagtgggtcctcggtgacgatcccg
cagaggatccatcagatggctgccagctacgtccaggtcacctccaacttcctctatgcc
actgaaatctgggaacaggccgagcagctgtctcgagagcagaaggagttctttgctgaa
ctggacaaggccatgggccccctggtcttcaacacaagcatcatgacggagctggtgcgc
tacacgcggcagggcctgcactggctgcgcctcgacgccaagtga

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