Acinetobacter baylyi: ACIAD0848
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Entry
ACIAD0848 CDS
T00185
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aci
Acinetobacter baylyi
Pathway
aci03030
DNA replication
aci03410
Base excision repair
aci03420
Nucleotide excision repair
aci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIAD0848 (ligA)
03410 Base excision repair
ACIAD0848 (ligA)
03420 Nucleotide excision repair
ACIAD0848 (ligA)
03430 Mismatch repair
ACIAD0848 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aci03032
]
ACIAD0848 (ligA)
03400 DNA repair and recombination proteins [BR:
aci03400
]
ACIAD0848 (ligA)
Enzymes [BR:
aci01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACIAD0848 (ligA)
DNA replication proteins [BR:
aci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACIAD0848 (ligA)
DNA repair and recombination proteins [BR:
aci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACIAD0848 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACIAD0848 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACIAD0848 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACIAD0848 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
DNA_pol_lambd_f
5_3_exonuc
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
CAG67748
UniProt:
Q6FDW0
LinkDB
All DBs
Position
835730..837760
Genome browser
AA seq
676 aa
AA seq
DB search
MMQPADIVAQMRQLIQLIAKHNHAYYVMDQPSITDNEYDQLFHQLKALEAEYPELTQADT
PTNRVGGQALSKFETVTHAVPMLSLGNVFNQEDLFAFARRIEERLPNQQIQYDVELKLDG
LAISLWYENGVLVRGVTRGDGETGEDITQNVKTIRNLPKHLQHHSVETPRFLEVRGEVLM
PKQGFERLNAANEAKGEKTFANPRNAAAGSLRQLDPAIAASRPLAFYAYGIAQCEPHHGL
GSMHESLQWLTQLGFEIAERQFLCSSIQEVQQCYEQIQQERPDLAVEIDGMVIKVDDLKQ
QQQLGFLSREPRWATAYKFPAEVAMTTVENIDWQVGRTGTLTPVARLQPVFVGGVTVSNV
TLHNIGEIHRLDVRVGDRVSVYRSGDVIPKVEKVWPEFRPELAEIVQLPEQCPVCSSPVV
MPEGEALARCSGGLYCAAQRIEAIRHFVSRKALDIEGLGDRWVESLLHLDLLKDVADIYH
LHEHREQLLTIEKMGEKSVQNLMDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQT
LDALKQADIEALKKTPDVGDITAEWIYDFFLAEHNIEVLDRLLAAGIHWDAPLAPTRQPL
NGESWVVTGTLETMGRDEATQRLQALGARVSGSVSSKTKCVVAGEKAGSKLDKAEKLQIR
VMNEQEFLAFLAQYSA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcctgctgatattgttgcgcaaatgcgtcaactgattcaactgatcgcaaag
cataatcatgcgtattatgtgatggatcaaccatcaattacggacaacgaatatgatcag
ttgtttcatcagcttaaagcactcgaagcagagtatcctgagttaactcaagcggataca
cctaccaaccgtgttggtggtcaggcactgagcaagtttgaaacggtgacccatgctgtg
cccatgttgtccttgggcaatgtatttaatcaagaagacttatttgcatttgcacgccgg
attgaagaacgtttgcccaatcagcagattcagtatgatgtcgagttaaaactggatggt
ctggcgatttcactgtggtatgaaaatggtgtactggtgcgtggtgtaacacgaggagat
ggcgaaacaggagaagatattacccaaaatgtcaaaactattcgaaatctacctaaacac
ttacaacatcattccgttgaaactccacgctttttagaggttcgtggcgaagtactcatg
ccaaaacagggctttgagcgacttaatgctgctaatgaggccaaaggcgagaagaccttt
gccaatccgcgtaatgcggcagcagggagtttacgtcagcttgatcctgcgattgctgct
tcacgtccattggcattttacgcttatgggattgcccagtgcgagccgcatcatggcttg
ggaagtatgcatgaaagcttacaatggctgacacaacttggctttgaaattgccgaacgt
caatttttatgttcttcgattcaggaagtacagcagtgttatgaacagattcagcaagaa
cgccctgatcttgcggttgaaattgatggcatggtcatcaaggtagatgatttaaaacag
cagcaacagcttggtttcttaagccgtgaaccacgttgggctacggcgtataagtttcct
gccgaagttgccatgaccacagtagaaaatattgattggcaggtagggcgaacagggaca
cttactccagttgctcgtttgcaacctgtatttgtaggtggggtaaccgtttccaatgtg
acattgcacaatattggtgaaattcatcgactagacgtgcgtgttggcgatcgggtcagt
gtttatcgaagcggtgatgtgattccaaaggttgaaaaagtctggccagaatttcgccca
gagctagccgaaattgtgcaattaccagaacaatgtcctgtttgttcatcgcctgtggtg
atgccagaaggcgaagcattggcacgttgttctgggggcttatactgtgctgcacagcgt
attgaagccattcgtcattttgtatcgcgtaaggccttggatattgaaggtttaggtgat
cgttgggtagagtcattattgcatcttgatttacttaaggatgtcgccgacatttaccac
ttgcacgaacaccgtgaacaattgctcactattgagaaaatgggcgagaagtctgtacaa
aatctaatggatgctattgaagccagtaaaaaaaccacattggcgcgttttatttatgca
cttggaatacggggggtaggtgaaacgacggcacgaatgctggccaatacctttcaaact
ctagatgccttaaagcaagcagatatagaagcactcaagaaaaccccagatgtcggtgat
atcaccgcagaatggatttatgatttctttttggctgagcataatattgaagtgcttgat
cgattgctggcagcaggaattcattgggatgcaccgcttgcaccgacccgacagcccctt
aatggcgaaagctgggtggtcacgggtacattggaaaccatggggcgtgatgaagcaact
cagcgcttgcaagcgttaggggcacgagtaagtggtagtgtatcgagtaaaaccaaatgt
gtcgttgcgggtgaaaaagcgggtagtaaactcgataaagccgaaaaactgcaaattcgt
gtgatgaatgaacaggagtttctggcatttttggcacaatactcagcttaa
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integrated database retrieval system
